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  5. Bradi4g02000

Bradi4g02000


Description : putative mitochondrial RNA helicase 1


Gene families : OG_42_0000844 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g02000
Cluster HCCA clusters: Cluster_84

Target Alias Description ECC score Gene Family Method Actions
10677 No alias DEAD box RNA helicase (RH3) 0.04 Orthogroups_2024-Update
99603 No alias putative mitochondrial RNA helicase 2 0.05 Orthogroups_2024-Update
Brara.E01722.1 No alias group-II intron splicing RNA helicase *(PMH) 0.03 Orthogroups_2024-Update
Glyma.02G281200 No alias putative mitochondrial RNA helicase 2 0.04 Orthogroups_2024-Update
Glyma.20G152200 No alias DEAD box RNA helicase (PRH75) 0.03 Orthogroups_2024-Update
HORVU5Hr1G011460.1 No alias group-II intron splicing RNA helicase *(PMH) 0.06 Orthogroups_2024-Update
Kfl00158_0080 kfl00158_0080_v1.1 (at5g62190 : 590.0) DEAD/DEAH box RNA helicase PRH75;... 0.02 Orthogroups_2024-Update
LOC_Os03g61220 No alias DEAD-box ATP-dependent RNA helicase 3, putative, expressed 0.02 Orthogroups_2024-Update
Potri.005G000100 No alias DEAD box RNA helicase (RH3) 0.02 Orthogroups_2024-Update
Potri.005G000500 No alias DEAD box RNA helicase (RH3) 0.05 Orthogroups_2024-Update
Potri.016G023100 No alias putative mitochondrial RNA helicase 2 0.03 Orthogroups_2024-Update
Pp1s7_15V6 No alias dead deah box helicase family expressed 0.02 Orthogroups_2024-Update
Seita.2G278900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G386700.1 No alias group-II intron splicing RNA helicase *(PMH) 0.05 Orthogroups_2024-Update
Seita.9G027200.1 No alias group-II intron splicing RNA helicase *(RH3) 0.1 Orthogroups_2024-Update
Sobic.001G028100.1 No alias group-II intron splicing RNA helicase *(RH3) 0.03 Orthogroups_2024-Update
Sobic.002G031700.1 No alias group-II intron splicing RNA helicase *(PMH) 0.04 Orthogroups_2024-Update
Sobic.002G268100.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.008G165900.1 No alias group-II intron splicing RNA helicase *(PMH) 0.03 Orthogroups_2024-Update
Sopen07g023350 No alias DEAD/DEAH box helicase 0.04 Orthogroups_2024-Update
evm.model.contig_3385.6 No alias (at5g26742 : 365.0) embryo defective 1138 (emb1138);... 0.02 Orthogroups_2024-Update
evm.model.contig_3450.5 No alias (q41382|rh7_spiol : 422.0) DEAD-box ATP-dependent RNA... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004347 glucose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
BP GO:0006006 glucose metabolic process IEP Predicted GO
BP GO:0006094 gluconeogenesis IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016853 isomerase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019319 hexose biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
BP GO:0044272 sulfur compound biosynthetic process IEP Predicted GO
BP GO:0046364 monosaccharide biosynthetic process IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 123 291
IPR001650 Helicase_C 329 437
No external refs found!