Description : Ribosomal protein L22p/L17e family protein
Gene families : OG_42_0001801 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001801_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Brachypodium release: Bradi4g08667 | |
Cluster | HCCA clusters: Cluster_132 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
96251 | No alias | Ribosomal protein L22p/L17e family protein | 0.11 | Orthogroups_2024-Update | |
At1g27400 | No alias | 60S ribosomal protein L17-1... | 0.04 | Orthogroups_2024-Update | |
Brara.B01721.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
Brara.G00848.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.12 | Orthogroups_2024-Update | |
Brara.G02572.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
Brara.H02055.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.08 | Orthogroups_2024-Update | |
Brara.I03016.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.06 | Orthogroups_2024-Update | |
Cre13.g568900 | No alias | Ribosomal protein L22p/L17e family protein | 0.18 | Orthogroups_2024-Update | |
GRMZM2G126594 | No alias | Ribosomal protein L22p/L17e family protein | 0.04 | Orthogroups_2024-Update | |
GRMZM2G148744 | No alias | Ribosomal protein L22p/L17e family protein | 0.17 | Orthogroups_2024-Update | |
Glyma.05G146800 | No alias | Ribosomal protein L22p/L17e family protein | 0.13 | Orthogroups_2024-Update | |
Glyma.08G103700 | No alias | Ribosomal protein L22p/L17e family protein | 0.17 | Orthogroups_2024-Update | |
Glyma.11G249700 | No alias | Ribosomal protein L22p/L17e family protein | 0.16 | Orthogroups_2024-Update | |
Glyma.18G007500 | No alias | Ribosomal protein L22p/L17e family protein | 0.07 | Orthogroups_2024-Update | |
HORVU5Hr1G052280.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.14 | Orthogroups_2024-Update | |
HORVU7Hr1G054010.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.1 | Orthogroups_2024-Update | |
Kfl00006_0040 | kfl00006_0040_v1.1 | (at1g67430 : 219.0) Ribosomal protein L22p/L17e family... | 0.12 | Orthogroups_2024-Update | |
LOC_Os08g41810 | No alias | ribosomal protein L22, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os09g08430 | No alias | ribosomal protein L22, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_10430182g0010 | No alias | (at1g27400 : 272.0) Ribosomal protein L22p/L17e family... | 0.09 | Orthogroups_2024-Update | |
MA_64923g0010 | No alias | (o48557|rl17_maize : 306.0) 60S ribosomal protein L17 -... | 0.05 | Orthogroups_2024-Update | |
Mp1g10230.1 | No alias | component RPL17 of LSU proteome component | 0.06 | Orthogroups_2024-Update | |
PSME_00016621-RA | No alias | (o48557|rl17_maize : 300.0) 60S ribosomal protein L17 -... | 0.07 | Orthogroups_2024-Update | |
Potri.010G060400 | No alias | Ribosomal protein L22p/L17e family protein | 0.02 | Orthogroups_2024-Update | |
Potri.012G096600 | No alias | Ribosomal protein L22p/L17e family protein | 0.07 | Orthogroups_2024-Update | |
Pp1s22_76V6 | No alias | 60s ribosomal protein | 0.06 | Orthogroups_2024-Update | |
Pp1s364_56V6 | No alias | 60s ribosomal protein | 0.2 | Orthogroups_2024-Update | |
Pp1s38_376V6 | No alias | 60s ribosomal protein | 0.12 | Orthogroups_2024-Update | |
Pp1s97_74V6 | No alias | 60s ribosomal protein | 0.16 | Orthogroups_2024-Update | |
Pp1s97_78V6 | No alias | 60s ribosomal protein | 0.18 | Orthogroups_2024-Update | |
Seita.5G119300.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.13 | Orthogroups_2024-Update | |
Seita.6G112100.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Seita.6G222100.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.02 | Orthogroups_2024-Update | |
Seita.7G314300.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.22 | Orthogroups_2024-Update | |
Seita.8G022000.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.05 | Orthogroups_2024-Update | |
Sobic.001G016400.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.21 | Orthogroups_2024-Update | |
Sobic.001G016500.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.07 | Orthogroups_2024-Update | |
Sobic.009G076400.1 | No alias | component *(uL22) of large ribosomal-subunit (LSU) proteome | 0.23 | Orthogroups_2024-Update | |
Solyc03g111230 | No alias | Ribosomal protein (AHRD V3.3 *** Q947H2_PETHY) | 0.21 | Orthogroups_2024-Update | |
Solyc06g071870 | No alias | Ribosomal protein (AHRD V3.3 *** Q947H2_PETHY) | 0.2 | Orthogroups_2024-Update | |
Solyc06g071880 | No alias | 60S ribosomal protein L17 (AHRD V3.3 *** A0A0D3QSL6_TOBAC) | 0.26 | Orthogroups_2024-Update | |
Sopen03g030370 | No alias | Ribosomal protein L22p/L17e | 0.21 | Orthogroups_2024-Update | |
Sopen06g028150 | No alias | Ribosomal protein L22p/L17e | 0.2 | Orthogroups_2024-Update | |
Sopen06g028160 | No alias | Ribosomal protein L22p/L17e | 0.24 | Orthogroups_2024-Update | |
evm.model.contig_2031.15 | No alias | (p35267|rl172_horvu : 178.0) 60S ribosomal protein L17-2... | 0.24 | Orthogroups_2024-Update | |
evm.model.tig00001215.8 | No alias | (o48557|rl17_maize : 230.0) 60S ribosomal protein L17 -... | 0.18 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003735 | structural constituent of ribosome | IEA | InterProScan predictions |
CC | GO:0005840 | ribosome | IEA | InterProScan predictions |
BP | GO:0006412 | translation | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
MF | GO:0001882 | nucleoside binding | IEP | Predicted GO |
MF | GO:0001883 | purine nucleoside binding | IEP | Predicted GO |
MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
MF | GO:0003723 | RNA binding | IEP | Predicted GO |
MF | GO:0003746 | translation elongation factor activity | IEP | Predicted GO |
MF | GO:0003747 | translation release factor activity | IEP | Predicted GO |
MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003922 | GMP synthase (glutamine-hydrolyzing) activity | IEP | Predicted GO |
MF | GO:0003924 | GTPase activity | IEP | Predicted GO |
MF | GO:0003937 | IMP cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0004386 | helicase activity | IEP | Predicted GO |
MF | GO:0004399 | histidinol dehydrogenase activity | IEP | Predicted GO |
MF | GO:0004643 | phosphoribosylaminoimidazolecarboxamide formyltransferase activity | IEP | Predicted GO |
MF | GO:0004809 | tRNA (guanine-N2-)-methyltransferase activity | IEP | Predicted GO |
MF | GO:0005525 | GTP binding | IEP | Predicted GO |
CC | GO:0005622 | intracellular | IEP | Predicted GO |
CC | GO:0005694 | chromosome | IEP | Predicted GO |
CC | GO:0005759 | mitochondrial matrix | IEP | Predicted GO |
BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0006163 | purine nucleotide metabolic process | IEP | Predicted GO |
BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | Predicted GO |
BP | GO:0006177 | GMP biosynthetic process | IEP | Predicted GO |
BP | GO:0006259 | DNA metabolic process | IEP | Predicted GO |
BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
BP | GO:0006414 | translational elongation | IEP | Predicted GO |
BP | GO:0006415 | translational termination | IEP | Predicted GO |
BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
MF | GO:0008079 | translation termination factor activity | IEP | Predicted GO |
MF | GO:0008097 | 5S rRNA binding | IEP | Predicted GO |
MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
MF | GO:0008175 | tRNA methyltransferase activity | IEP | Predicted GO |
MF | GO:0008483 | transaminase activity | IEP | Predicted GO |
BP | GO:0009119 | ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0009163 | nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0009165 | nucleotide biosynthetic process | IEP | Predicted GO |
MF | GO:0016423 | tRNA (guanine) methyltransferase activity | IEP | Predicted GO |
MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
MF | GO:0016742 | hydroxymethyl-, formyl- and related transferase activity | IEP | Predicted GO |
MF | GO:0016769 | transferase activity, transferring nitrogenous groups | IEP | Predicted GO |
MF | GO:0016814 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines | IEP | Predicted GO |
MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
MF | GO:0016884 | carbon-nitrogen ligase activity, with glutamine as amido-N-donor | IEP | Predicted GO |
MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
MF | GO:0019001 | guanyl nucleotide binding | IEP | Predicted GO |
MF | GO:0019238 | cyclohydrolase activity | IEP | Predicted GO |
MF | GO:0019843 | rRNA binding | IEP | Predicted GO |
BP | GO:0022411 | cellular component disassembly | IEP | Predicted GO |
CC | GO:0031974 | membrane-enclosed lumen | IEP | Predicted GO |
MF | GO:0032549 | ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032550 | purine ribonucleoside binding | IEP | Predicted GO |
MF | GO:0032561 | guanyl ribonucleotide binding | IEP | Predicted GO |
BP | GO:0032984 | protein-containing complex disassembly | IEP | Predicted GO |
MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
BP | GO:0042278 | purine nucleoside metabolic process | IEP | Predicted GO |
BP | GO:0042451 | purine nucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0042455 | ribonucleoside biosynthetic process | IEP | Predicted GO |
CC | GO:0043233 | organelle lumen | IEP | Predicted GO |
BP | GO:0043624 | cellular protein complex disassembly | IEP | Predicted GO |
BP | GO:0046037 | GMP metabolic process | IEP | Predicted GO |
BP | GO:0046128 | purine ribonucleoside metabolic process | IEP | Predicted GO |
BP | GO:0046129 | purine ribonucleoside biosynthetic process | IEP | Predicted GO |
BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
CC | GO:0070013 | intracellular organelle lumen | IEP | Predicted GO |
BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
BP | GO:0072521 | purine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | Predicted GO |
MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
MF | GO:0140097 | catalytic activity, acting on DNA | IEP | Predicted GO |
BP | GO:1901068 | guanosine-containing compound metabolic process | IEP | Predicted GO |
BP | GO:1901070 | guanosine-containing compound biosynthetic process | IEP | Predicted GO |
BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | Predicted GO |
BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
BP | GO:1901659 | glycosyl compound biosynthetic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001063 | Ribosomal_L22 | 47 | 182 |
No external refs found! |