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  5. Bradi4g08727

Bradi4g08727


Description : RNA binding;abscisic acid binding


Gene families : OG_42_0001337 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001337_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g08727
Cluster HCCA clusters: Cluster_1

Target Alias Description ECC score Gene Family Method Actions
442777 No alias RNA-binding protein-defense related 1 0.02 Orthogroups_2024-Update
Cre06.g290450 No alias RNA-binding protein-defense related 1 0.02 Orthogroups_2024-Update
Glyma.03G220900 No alias RNA binding;abscisic acid binding 0.03 Orthogroups_2024-Update
HORVU5Hr1G050820.6 No alias transcription factor *(FCA/SSF) 0.06 Orthogroups_2024-Update
LOC_Os01g71200 No alias RNA recognition motif containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s12_239V6 No alias rna binding 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
MF GO:0005516 calmodulin binding IEP Predicted GO
BP GO:0006811 ion transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
MF GO:0015075 ion transmembrane transporter activity IEP Predicted GO
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Predicted GO
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043631 RNA polyadenylation IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000504 RRM_dom 220 284
IPR000504 RRM_dom 129 191
IPR001202 WW_dom 625 652
No external refs found!