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  5. Bradi4g17960

Bradi4g17960


Description : C-terminal domain phosphatase-like 3


Gene families : OG_42_0000924 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000924_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g17960
Cluster HCCA clusters: Cluster_225

Target Alias Description ECC score Gene Family Method Actions
A4A49_21476 No alias rna polymerase ii c-terminal domain phosphatase-like 3 0.01 Orthogroups_2024-Update
At2g33540 No alias RNA polymerase II C-terminal domain phosphatase-like 3... 0.05 Orthogroups_2024-Update
Cre06.g249650 No alias C-terminal domain phosphatase-like 3 0.01 Orthogroups_2024-Update
Glyma.08G257900 No alias C-terminal domain phosphatase-like 3 0.06 Orthogroups_2024-Update
Glyma.18G282300 No alias C-terminal domain phosphatase-like 3 0.04 Orthogroups_2024-Update
Kfl00290_0070 kfl00290_0070_v1.1 (at2g33540 : 304.0) C-terminal domain phosphatase-like 3... 0.02 Orthogroups_2024-Update
MA_2427g0010 No alias (at2g33540 : 562.0) C-terminal domain phosphatase-like 3... 0.03 Orthogroups_2024-Update
PSME_00014637-RA No alias (at2g33540 : 561.0) C-terminal domain phosphatase-like 3... 0.06 Orthogroups_2024-Update
Potri.001G065600 No alias C-terminal domain phosphatase-like 3 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
InterPro domains Description Start Stop
IPR004274 FCP1_dom 940 1103
No external refs found!