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  5. Sopen07g011840

Sopen07g011840


Description : Chlorophyll A-B binding protein


Gene families : OG_42_0000070 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000070_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g011840
Cluster HCCA clusters: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
407444 No alias light-harvesting chlorophyll B-binding protein 3 0.02 Orthogroups_2024-Update
75552 No alias photosystem II light harvesting complex gene 2.1 0.02 Orthogroups_2024-Update
At1g45474 No alias Photosystem I chlorophyll a/b-binding protein 5,... 0.02 Orthogroups_2024-Update
Bradi3g58020 No alias photosystem I light harvesting complex gene 5 0.03 Orthogroups_2024-Update
Bradi4g31257 No alias photosystem I light harvesting complex gene 6 0.04 Orthogroups_2024-Update
Glyma.07G047600 No alias photosystem I light harvesting complex gene 2 0.04 Orthogroups_2024-Update
Glyma.15G179400 No alias photosystem I light harvesting complex gene 6 0.03 Orthogroups_2024-Update
HORVU1Hr1G088900.2 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G088920.3 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU1Hr1G089180.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU4Hr1G015260.2 No alias component *(LHCb5) of LHC-II complex 0.02 Orthogroups_2024-Update
HORVU6Hr1G016850.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016880.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
HORVU6Hr1G016940.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.03 Orthogroups_2024-Update
LOC_Os08g33820 No alias chlorophyll A-B binding protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_10431493g0010 No alias (at3g54890 : 355.0) Encodes a component of the light... 0.03 Orthogroups_2024-Update
MA_176279g0010 No alias (at4g10340 : 387.0) photosystem II encoding the... 0.05 Orthogroups_2024-Update
MA_97315g0010 No alias (p15193|cb2a_pinsy : 556.0) Chlorophyll a-b binding... 0.02 Orthogroups_2024-Update
Mp7g05890.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06710.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06720.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06730.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g06750.1 No alias component LHCb1/2/3 of LHC-II complex 0.03 Orthogroups_2024-Update
Mp7g06770.1 No alias component LHCb1/2/3 of LHC-II complex 0.02 Orthogroups_2024-Update
Mp7g08940.1 No alias component LHCb1/2/3 of LHC-II complex 0.01 Orthogroups_2024-Update
Mp8g13180.1 No alias component LHCa2 of LHC-I complex 0.02 Orthogroups_2024-Update
Potri.002G221400 No alias photosystem II light harvesting complex gene 2.2 0.02 Orthogroups_2024-Update
Pp1s628_7V6 No alias light-harvesting complex ii protein lhcb5 0.03 Orthogroups_2024-Update
Pp1s76_196V6 No alias chlorophyll a b binding 0.02 Orthogroups_2024-Update
Seita.1G330600.1 No alias linker protein *(LHCa5) between PS-I complex and NDH complex 0.02 Orthogroups_2024-Update
Seita.2G217800.1 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.04 Orthogroups_2024-Update
Sobic.001G177000.1 No alias component *(LHCb1/2/3) of LHC-II complex 0.02 Orthogroups_2024-Update
Sobic.002G215000.2 No alias linker protein *(LHCa6) between PS-I complex and NDH complex 0.04 Orthogroups_2024-Update
Sobic.004G308700.1 No alias linker protein *(LHCa5) between PS-I complex and NDH complex 0.03 Orthogroups_2024-Update
Solyc07g022900 No alias Chlorophyll a-b binding protein, chloroplastic (AHRD... 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022796 Chloroa_b-bind 62 230
No external refs found!