Bradi4g24120

Description : ATP-binding casette family G25

Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi4g24120
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
A4A49_26174	No alias	abc transporter g family member 14	0.02	Orthogroups_2024-Update
At5g06530	No alias	ABC transporter G family member 22...	0.05	Orthogroups_2024-Update
Brara.B01985.1	No alias	subfamily ABCG transporter	0.04	Orthogroups_2024-Update
Brara.D00598.1	No alias	subfamily ABCG transporter	0.05	Orthogroups_2024-Update
Brara.J02569.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Cre17.g743547	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Glyma.01G091100	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Glyma.02G188300	No alias	ABC-2 type transporter family protein	0.02	Orthogroups_2024-Update
Glyma.03G204800	No alias	ABC-2 type transporter family protein	0.05	Orthogroups_2024-Update
Glyma.10G205600	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
PSME_00005319-RA	No alias	(at5g06530 : 521.0) ABC-2 type transporter family...	0.02	Orthogroups_2024-Update
PSME_00045465-RA	No alias	(at1g31770 : 752.0) ATP-binding cassette 14 (ABCG14);...	0.02	Orthogroups_2024-Update
Potri.006G199500	No alias	ABC-2 type transporter family protein	0.03	Orthogroups_2024-Update
Pp1s138_50V6	No alias	white-brown-complex abc transporter family	0.02	Orthogroups_2024-Update
Pp1s65_100V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Seita.6G049400.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Seita.8G055700.1	No alias	subfamily ABCG transporter	0.05	Orthogroups_2024-Update
Sopen08g001610	No alias	ABC-2 type transporter	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	InterProScan predictions
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	InterProScan predictions
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATPase activity	IEA	InterProScan predictions
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000786	nucleosome	IEP	Predicted GO
MF	GO:0003677	DNA binding	IEP	Predicted GO
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
MF	GO:0004478	methionine adenosyltransferase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
CC	GO:0005634	nucleus	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0006556	S-adenosylmethionine biosynthetic process	IEP	Predicted GO
CC	GO:0016021	integral component of membrane	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0030976	thiamine pyrophosphate binding	IEP	Predicted GO
CC	GO:0031224	intrinsic component of membrane	IEP	Predicted GO
CC	GO:0032993	protein-DNA complex	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
CC	GO:0043227	membrane-bounded organelle	IEP	Predicted GO
CC	GO:0043231	intracellular membrane-bounded organelle	IEP	Predicted GO
BP	GO:0044272	sulfur compound biosynthetic process	IEP	Predicted GO
CC	GO:0044427	chromosomal part	IEP	Predicted GO
CC	GO:0044815	DNA packaging complex	IEP	Predicted GO
BP	GO:0046500	S-adenosylmethionine metabolic process	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
MF	GO:0048037	cofactor binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:1901681	sulfur compound binding	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	85	236
IPR013525	ABC_2_trans	418	623

External Links

No external refs found!

Bradi4g24120

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation