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  5. Bradi4g28870

Bradi4g28870


Description : Glucose-methanol-choline (GMC) oxidoreductase family protein


Gene families : OG_42_0000273 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g28870
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_18141 No alias protein hothead 0.02 Orthogroups_2024-Update
Glyma.05G050100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Glyma.07G009900 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Glyma.08G193100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
HORVU0Hr1G022360.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os08g31030 No alias HOTHEAD precursor, putative, expressed 0.03 Orthogroups_2024-Update
MA_138671g0010 No alias (at5g51950 : 104.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_41268g0010 No alias (at1g12570 : 455.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
MA_423598g0010 No alias (at1g14190 : 209.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00025174-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00025333-RA No alias (at1g14190 : 320.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00032105-RA No alias (at1g14190 : 453.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00032973-RA No alias (at1g12570 : 369.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00034434-RA No alias (at1g12570 : 458.0) Glucose-methanol-choline (GMC)... 0.04 Orthogroups_2024-Update
PSME_00038869-RA No alias (at1g14190 : 353.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00041186-RA No alias (at1g12570 : 451.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00042692-RA No alias (at1g14190 : 441.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00047795-RA No alias (at1g73050 : 409.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00048296-RA No alias (at1g14190 : 439.0) Glucose-methanol-choline (GMC)... 0.03 Orthogroups_2024-Update
PSME_00049535-RA No alias (at1g14190 : 155.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00051118-RA No alias (at5g51950 : 373.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00052334-RA No alias (at1g12570 : 469.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
PSME_00052828-RA No alias (at1g72970 : 228.0) Originally identified as a mutation... 0.02 Orthogroups_2024-Update
PSME_00054443-RA No alias (at1g12570 : 421.0) Glucose-methanol-choline (GMC)... 0.02 Orthogroups_2024-Update
Potri.001G111500 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.03 Orthogroups_2024-Update
Potri.010G168100 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.04 Orthogroups_2024-Update
Solyc03g121600 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.02 Orthogroups_2024-Update
Solyc06g035580 No alias Glucose-methanol-choline (GMC) oxidoreductase family... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 57 331
IPR007867 GMC_OxRtase_C 427 574
No external refs found!