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  5. Bradi4g34870

Bradi4g34870


Description : basic helix-loop-helix (bHLH) DNA-binding superfamily protein


Gene families : OG_42_0000125 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000125_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi4g34870
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
A4A49_19416 No alias transcription factor bhlh49 0.01 Orthogroups_2024-Update
At2g18300 No alias Basic helix-loop-helix (BHLH) DNA-binding superfamily... 0.02 Orthogroups_2024-Update
At2g42300 No alias Transcription factor bHLH48... 0.01 Orthogroups_2024-Update
Bradi1g35990 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.12 Orthogroups_2024-Update
Brara.D00267.1 No alias regulatory protein (CIB) of blue light perception &... 0.01 Orthogroups_2024-Update
Brara.G00193.1 No alias regulatory protein (CIB) of blue light perception &... 0.03 Orthogroups_2024-Update
Brara.G01758.1 No alias regulatory protein (CIB) of blue light perception &... 0.02 Orthogroups_2024-Update
Brara.G02837.1 No alias regulatory protein (CIB) of blue light perception &... 0.01 Orthogroups_2024-Update
GRMZM2G083504 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 Orthogroups_2024-Update
GRMZM2G144275 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G174800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.12G042800 No alias cryptochrome-interacting basic-helix-loop-helix 1 0.02 Orthogroups_2024-Update
Glyma.18G156900 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Mp6g18480.1 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.01 Orthogroups_2024-Update
PSME_00008023-RA No alias (at1g26260 : 101.0) Encodes CIB5... 0.01 Orthogroups_2024-Update
Seita.2G269400.1 No alias regulatory protein (CIB) of blue light perception &... 0.04 Orthogroups_2024-Update
Solyc09g097870 No alias bHLH transcription factor 062 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 130 177
No external refs found!