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Description : hydroxyproline-rich glycoprotein family protein
Gene families : OG_42_0006020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006020_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Brachypodium release: Bradi5g10800 | |
| Cluster | HCCA clusters: Cluster_188 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Cre12.g508000 | No alias | hydroxyproline-rich glycoprotein family protein | 0.01 | Orthogroups_2024-Update | |
| Glyma.11G202700 | No alias | hydroxyproline-rich glycoprotein family protein | 0.02 | Orthogroups_2024-Update | |
| Glyma.18G048200 | No alias | hydroxyproline-rich glycoprotein family protein | 0.02 | Orthogroups_2024-Update | |
| Pp1s159_2V6 | No alias | MTG13.14; proline-rich protein family [Arabidopsis thaliana] | 0.02 | Orthogroups_2024-Update | |
| Seita.7G106100.1 | No alias | component *(Tic40) of inner envelope TIC translocation system | 0.03 | Orthogroups_2024-Update | |
| Solyc11g020300 | No alias | Protein TIC 40, chloroplastic (AHRD V3.3 *** TIC40_PEA) | 0.04 | Orthogroups_2024-Update | |
| Sopen11g010590 | No alias | hypothetical protein | 0.03 | Orthogroups_2024-Update |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0000105 | histidine biosynthetic process | IEP | Predicted GO |
| MF | GO:0003676 | nucleic acid binding | IEP | Predicted GO |
| MF | GO:0003697 | single-stranded DNA binding | IEP | Predicted GO |
| MF | GO:0003723 | RNA binding | IEP | Predicted GO |
| MF | GO:0003743 | translation initiation factor activity | IEP | Predicted GO |
| MF | GO:0003916 | DNA topoisomerase activity | IEP | Predicted GO |
| MF | GO:0003918 | DNA topoisomerase type II (ATP-hydrolyzing) activity | IEP | Predicted GO |
| MF | GO:0005488 | binding | IEP | Predicted GO |
| CC | GO:0005730 | nucleolus | IEP | Predicted GO |
| CC | GO:0005852 | eukaryotic translation initiation factor 3 complex | IEP | Predicted GO |
| BP | GO:0006082 | organic acid metabolic process | IEP | Predicted GO |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | Predicted GO |
| BP | GO:0006265 | DNA topological change | IEP | Predicted GO |
| BP | GO:0006396 | RNA processing | IEP | Predicted GO |
| BP | GO:0006413 | translational initiation | IEP | Predicted GO |
| BP | GO:0006520 | cellular amino acid metabolic process | IEP | Predicted GO |
| BP | GO:0006547 | histidine metabolic process | IEP | Predicted GO |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | Predicted GO |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | Predicted GO |
| MF | GO:0008094 | DNA-dependent ATPase activity | IEP | Predicted GO |
| MF | GO:0008135 | translation factor activity, RNA binding | IEP | Predicted GO |
| MF | GO:0008173 | RNA methyltransferase activity | IEP | Predicted GO |
| MF | GO:0008252 | nucleotidase activity | IEP | Predicted GO |
| MF | GO:0008253 | 5'-nucleotidase activity | IEP | Predicted GO |
| BP | GO:0009987 | cellular process | IEP | Predicted GO |
| BP | GO:0016070 | RNA metabolic process | IEP | Predicted GO |
| BP | GO:0016226 | iron-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0016462 | pyrophosphatase activity | IEP | Predicted GO |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
| MF | GO:0016817 | hydrolase activity, acting on acid anhydrides | IEP | Predicted GO |
| MF | GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | IEP | Predicted GO |
| MF | GO:0016887 | ATPase activity | IEP | Predicted GO |
| MF | GO:0017111 | nucleoside-triphosphatase activity | IEP | Predicted GO |
| BP | GO:0019752 | carboxylic acid metabolic process | IEP | Predicted GO |
| BP | GO:0022613 | ribonucleoprotein complex biogenesis | IEP | Predicted GO |
| BP | GO:0031163 | metallo-sulfur cluster assembly | IEP | Predicted GO |
| MF | GO:0031369 | translation initiation factor binding | IEP | Predicted GO |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | Predicted GO |
| BP | GO:0034660 | ncRNA metabolic process | IEP | Predicted GO |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | Predicted GO |
| BP | GO:0042254 | ribosome biogenesis | IEP | Predicted GO |
| BP | GO:0043436 | oxoacid metabolic process | IEP | Predicted GO |
| BP | GO:0044085 | cellular component biogenesis | IEP | Predicted GO |
| BP | GO:0044237 | cellular metabolic process | IEP | Predicted GO |
| BP | GO:0046483 | heterocycle metabolic process | IEP | Predicted GO |
| BP | GO:0052803 | imidazole-containing compound metabolic process | IEP | Predicted GO |
| MF | GO:0061505 | DNA topoisomerase II activity | IEP | Predicted GO |
| BP | GO:0071103 | DNA conformation change | IEP | Predicted GO |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | Predicted GO |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | Predicted GO |
| MF | GO:0097159 | organic cyclic compound binding | IEP | Predicted GO |
| MF | GO:0140098 | catalytic activity, acting on RNA | IEP | Predicted GO |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | Predicted GO |
| MF | GO:1901363 | heterocyclic compound binding | IEP | Predicted GO |
No InterPro domains available for this sequence
| No external refs found! |