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  5. Bradi5g16666

Bradi5g16666


Description : GATA type zinc finger transcription factor family protein


Gene families : OG_42_0000555 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000555_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g16666
Cluster HCCA clusters: Cluster_102

Target Alias Description ECC score Gene Family Method Actions
Brara.E00530.1 No alias LIM-type transcription factor 0.02 Orthogroups_2024-Update
Brara.I04216.1 No alias LIM-type transcription factor 0.02 Orthogroups_2024-Update
Glyma.08G012700 No alias GATA type zinc finger transcription factor family protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G028180.1 No alias LIM-type transcription factor 0.04 Orthogroups_2024-Update
Potri.014G080900 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Potri.015G072400 No alias GATA type zinc finger transcription factor family protein 0.03 Orthogroups_2024-Update
Sobic.004G303700.1 No alias LIM-type transcription factor 0.04 Orthogroups_2024-Update
Solyc03g114000 No alias Pollen-specific protein SF3, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP Predicted GO
BP GO:0008652 cellular amino acid biosynthetic process IEP Predicted GO
BP GO:0009072 aromatic amino acid family metabolic process IEP Predicted GO
BP GO:0009073 aromatic amino acid family biosynthetic process IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001781 Znf_LIM 105 159
IPR001781 Znf_LIM 10 65
No external refs found!