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  5. Bradi5g17230

Bradi5g17230


Description : YELLOW STRIPE like 2


Gene families : OG_42_0000320 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000320_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g17230
Cluster HCCA clusters: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
A4A49_27452 No alias metal-nicotianamine transporter ysl3 0.03 Orthogroups_2024-Update
Brara.H00358.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
LOC_Os04g44320 No alias transposon protein, putative, unclassified, expressed 0.02 Orthogroups_2024-Update
MA_10429029g0010 No alias (at5g53550 : 696.0) YELLOW STRIPE like 3 (YSL3);... 0.02 Orthogroups_2024-Update
MA_110581g0010 No alias (at5g53550 : 808.0) YELLOW STRIPE like 3 (YSL3);... 0.02 Orthogroups_2024-Update
Mp4g01710.1 No alias iron chelator transporter (YSL). ferric cation-chelator... 0.01 Orthogroups_2024-Update
PSME_00019280-RA No alias (at5g53550 : 798.0) YELLOW STRIPE like 3 (YSL3);... 0.03 Orthogroups_2024-Update
PSME_00036873-RA No alias (at1g65730 : 901.0) Arabidopsis thaliana... 0.03 Orthogroups_2024-Update
Pp1s2_335V6 No alias oligopeptide transporter opt family 0.02 Orthogroups_2024-Update
Seita.1G254200.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Seita.7G172900.1 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update
Sobic.006G152700.2 No alias iron chelator transporter *(YSL) & ferric... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0006879 cellular iron ion homeostasis IEP Predicted GO
MF GO:0008199 ferric iron binding IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0008536 Ran GTPase binding IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0019825 oxygen binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
MF GO:0051536 iron-sulfur cluster binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
MF GO:0051540 metal cluster binding IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055072 iron ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0061024 membrane organization IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:0120009 intermembrane lipid transfer IEP Predicted GO
MF GO:0120013 intermembrane lipid transfer activity IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR004813 OPT 75 687
No external refs found!