1. Home
  2. Species
  3. Brachypodium distachyon
  4. Sequence
  5. Bradi5g18530

Bradi5g18530


Description : indeterminate(ID)-domain 4


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g18530
Cluster HCCA clusters: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
117908 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
At1g55110 No alias Protein indeterminate-domain 7... 0.03 Orthogroups_2024-Update
Bradi3g26910 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Bradi4g37540 No alias indeterminate(ID)-domain 7 0.05 Orthogroups_2024-Update
Brara.E02737.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.F01854.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.H00083.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Brara.I02041.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Brara.I04981.1 No alias C2H2 subclass IDD transcription factor 0.04 Orthogroups_2024-Update
GRMZM2G027333 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
GRMZM2G151309 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G176600 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.03G179700 No alias indeterminate(ID)-domain 4 0.02 Orthogroups_2024-Update
Glyma.04G033300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.08G092300 No alias indeterminate(ID)-domain 14 0.02 Orthogroups_2024-Update
Glyma.19G180400 No alias indeterminate(ID)-domain 4 0.04 Orthogroups_2024-Update
Glyma.20G005800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
MA_10428315g0010 No alias (at1g34370 : 211.0) Encodes a putative nuclear... 0.02 Orthogroups_2024-Update
MA_26324g0010 No alias (at1g03840 : 352.0) MGP is a nuclear-localized putative... 0.02 Orthogroups_2024-Update
Mp5g20530.1 No alias C2H2 zinc finger transcription factor 0.02 Orthogroups_2024-Update
PSME_00045485-RA No alias (at1g03840 : 315.0) MGP is a nuclear-localized putative... 0.02 Orthogroups_2024-Update
Potri.002G263600 No alias indeterminate(ID)-domain 2 0.02 Orthogroups_2024-Update
Potri.008G142500 No alias indeterminate(ID)-domain 5 0.02 Orthogroups_2024-Update
Potri.013G019200 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Potri.T034600 No alias indeterminate(ID)-domain 2 0.03 Orthogroups_2024-Update
Seita.2G303400.1 No alias C2H2 subclass IDD transcription factor 0.03 Orthogroups_2024-Update
Seita.7G201000.1 No alias C2H2 subclass IDD transcription factor 0.02 Orthogroups_2024-Update
Sobic.003G417500.1 No alias C2H2 subclass IDD transcription factor 0.06 Orthogroups_2024-Update
Solyc01g099340 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.03 Orthogroups_2024-Update
Solyc09g074780 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.03 Orthogroups_2024-Update
Sopen03g040470 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update
Sopen06g022130 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen07g027520 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen09g027420 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Sopen11g027970 No alias Zinc finger, C2H2 type 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005215 transporter activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0008037 cell recognition IEP Predicted GO
BP GO:0008272 sulfate transport IEP Predicted GO
MF GO:0015116 sulfate transmembrane transporter activity IEP Predicted GO
BP GO:0015988 energy coupled proton transmembrane transport, against electrochemical gradient IEP Predicted GO
BP GO:0015991 ATP hydrolysis coupled proton transport IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
MF GO:0022857 transmembrane transporter activity IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0048544 recognition of pollen IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0055085 transmembrane transport IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072348 sulfur compound transport IEP Predicted GO
BP GO:0090662 ATP hydrolysis coupled transmembrane transport IEP Predicted GO
BP GO:0099131 ATP hydrolysis coupled ion transmembrane transport IEP Predicted GO
BP GO:0099132 ATP hydrolysis coupled cation transmembrane transport IEP Predicted GO
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR022755 Znf_C2H2_jaz 91 113
No external refs found!