Bradi5g18680

Description : heat shock transcription factor B2A

Gene families : OG_42_0000092 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g18680
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
At1g32330	No alias	Heat stress transcription factor A-1d...	0.03	Orthogroups_2024-Update
Brara.A00901.1	No alias	transcriptional regulator *(HsfA1) & HSF-type...	0.02	Orthogroups_2024-Update
Brara.J00564.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.K01279.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G115456	No alias	heat shock factor 3	0.02	Orthogroups_2024-Update
GRMZM2G165972	No alias	heat shock transcription factor A6B	0.02	Orthogroups_2024-Update
Glyma.01G217400	No alias	winged-helix DNA-binding transcription factor family protein	0.04	Orthogroups_2024-Update
Glyma.11G025700	No alias	winged-helix DNA-binding transcription factor family protein	0.06	Orthogroups_2024-Update
Glyma.16G196200	No alias	heat shock transcription factor B2A	0.02	Orthogroups_2024-Update
HORVU5Hr1G105770.2	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
LOC_Os03g06630	No alias	heat stress transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os04g48030	No alias	heat stress transcription factor B-1, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os07g44690	No alias	HSF-type DNA-binding domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os08g36700	No alias	HSF-type DNA-binding domain containing protein, expressed	0.04	Orthogroups_2024-Update
MA_110587g0010	No alias	(at1g46264 : 202.0) Encodes SCHIZORIZA, a member of Heat...	0.02	Orthogroups_2024-Update
MA_124940g0010	No alias	(at4g36990 : 91.7) encodes a protein whose sequence is...	0.03	Orthogroups_2024-Update
PSME_00037755-RA	No alias	(at1g46264 : 167.0) Encodes SCHIZORIZA, a member of Heat...	0.03	Orthogroups_2024-Update
PSME_00055440-RA	No alias	(at3g22830 : 268.0) member of Heat Stress Transcription...	0.04	Orthogroups_2024-Update
Seita.2G282400.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G318300.1	No alias	HSF-type transcription factor	0.03	Orthogroups_2024-Update
Seita.9G531900.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.001G243000.1	No alias	HSF-type transcription factor	0.02	Orthogroups_2024-Update
Sobic.001G496200.1	No alias	HSF-type transcription factor	0.04	Orthogroups_2024-Update
Sobic.002G051900.1	No alias	transcriptional memory factor *(HsfA3) & HSF-type...	0.01	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	InterProScan predictions
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
BP	GO:0006308	DNA catabolic process	IEP	Predicted GO
BP	GO:0007010	cytoskeleton organization	IEP	Predicted GO
MF	GO:0015926	glucosidase activity	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016840	carbon-nitrogen lyase activity	IEP	Predicted GO
MF	GO:0016843	amine-lyase activity	IEP	Predicted GO
MF	GO:0016844	strictosidine synthase activity	IEP	Predicted GO
MF	GO:0016872	intramolecular lyase activity	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0031072	heat shock protein binding	IEP	Predicted GO
MF	GO:0042393	histone binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0090599	alpha-glucosidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	11	100

External Links

No external refs found!

Bradi5g18680

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation