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  5. Bradi5g19180

Bradi5g19180


Description : brassinosteroid-responsive RING-H2


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g19180
Cluster HCCA clusters: Cluster_199

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G134023 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Glyma.05G182000 No alias RING-H2 finger A2A 0.04 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.02 Orthogroups_2024-Update
MA_15246g0010 No alias (at2g04240 : 83.2) Encodes a small protein with an... 0.03 Orthogroups_2024-Update
MA_169947g0010 No alias (at3g61460 : 156.0) Encodes a novel ring finger protein... 0.02 Orthogroups_2024-Update
MA_711804g0010 No alias (at3g43430 : 92.4) RING/U-box superfamily protein;... 0.04 Orthogroups_2024-Update
MA_9409078g0010 No alias (at3g43430 : 99.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.02 Orthogroups_2024-Update
Sobic.010G180300.2 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g083660 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT1G63840.1) 0.03 Orthogroups_2024-Update
Solyc05g018760 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 113 157
No external refs found!