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  5. Bradi5g21780

Bradi5g21780


Description : Arabidopsis thaliana protein of unknown function (DUF794)


Gene families : OG_42_0001137 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001137_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g21780
Cluster HCCA clusters: Cluster_125

Target Alias Description ECC score Gene Family Method Actions
84056 No alias Arabidopsis thaliana protein of unknown function (DUF794) 0.02 Orthogroups_2024-Update
A4A49_36605 No alias apo protein 2, chloroplastic 0.02 Orthogroups_2024-Update
HORVU2Hr1G098680.2 No alias organelle RNA splicing factor *(APO) 0.03 Orthogroups_2024-Update
HORVU2Hr1G098720.2 No alias organelle RNA splicing factor *(APO) 0.03 Orthogroups_2024-Update
MA_931234g0010 No alias (at1g64810 : 397.0) chloroplast APO1; ACCUMULATION OF... 0.03 Orthogroups_2024-Update
Potri.017G037200 No alias Arabidopsis thaliana protein of unknown function (DUF794) 0.03 Orthogroups_2024-Update
Solyc09g009400 No alias APO protein 3, mitochondrial, putative (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update
Sopen08g028600 No alias APO RNA-binding 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003848 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase activity IEP Predicted GO
MF GO:0003919 FMN adenylyltransferase activity IEP Predicted GO
BP GO:0006575 cellular modified amino acid metabolic process IEP Predicted GO
BP GO:0006760 folic acid-containing compound metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
BP GO:0009396 folic acid-containing compound biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016778 diphosphotransferase activity IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042398 cellular modified amino acid biosynthetic process IEP Predicted GO
BP GO:0042558 pteridine-containing compound metabolic process IEP Predicted GO
BP GO:0042559 pteridine-containing compound biosynthetic process IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
MF GO:0046422 violaxanthin de-epoxidase activity IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070566 adenylyltransferase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR023342 APO_dom 62 254
IPR023342 APO_dom 297 410
No external refs found!