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  5. Bradi5g23280

Bradi5g23280


Description : bifunctional nuclease i


Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Brachypodium release: Bradi5g23280
Cluster HCCA clusters: Cluster_20

Target Alias Description ECC score Gene Family Method Actions
At4g21600 No alias Endonuclease 5 [Source:UniProtKB/Swiss-Prot;Acc:F4JJL3] 0.03 Orthogroups_2024-Update
Brara.G02776.1 No alias EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO) 0.03 Orthogroups_2024-Update
GRMZM2G168744 No alias bifunctional nuclease i 0.02 Orthogroups_2024-Update
PSME_00037308-RA No alias (at4g21585 : 342.0) Encodes a putative endonuclease but... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA InterProScan predictions
MF GO:0004519 endonuclease activity IEA InterProScan predictions
BP GO:0006308 DNA catabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0005975 carbohydrate metabolic process IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
MF GO:0008233 peptidase activity IEP Predicted GO
MF GO:0008234 cysteine-type peptidase activity IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Predicted GO
MF GO:0016892 endoribonuclease activity, producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0016894 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters IEP Predicted GO
MF GO:0033897 ribonuclease T2 activity IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Predicted GO
InterPro domains Description Start Stop
IPR003154 S1/P1nuclease 27 291
No external refs found!