Bradi5g24430

Description : endonuclease 2

Gene families : OG_42_0001102 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001102_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Brachypodium release: Bradi5g24430
Cluster	HCCA clusters: Cluster_37

Target	Alias	Description	ECC score	Gene Family Method
At1g68290	No alias	Endonuclease 2 [Source:UniProtKB/Swiss-Prot;Acc:Q9C9G4]	0.02	Orthogroups_2024-Update
Bradi5g24140	No alias	endonuclease 4	0.02	Orthogroups_2024-Update
GRMZM2G041352	No alias	endonuclease 2	0.03	Orthogroups_2024-Update
HORVU2Hr1G112860.1	No alias	EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)	0.02	Orthogroups_2024-Update
LOC_Os01g03730	No alias	nuclease PA3, putative, expressed	0.05	Orthogroups_2024-Update
PSME_00037308-RA	No alias	(at4g21585 : 342.0) Encodes a putative endonuclease but...	0.02	Orthogroups_2024-Update
Seita.3G034900.1	No alias	EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)	0.03	Orthogroups_2024-Update
Sobic.003G087300.1	No alias	EC_3.1 hydrolase acting on ester bond & DNA endonuclease *(ENDO)	0.03	Orthogroups_2024-Update
Solyc02g078920	No alias	Nuclease S1 (AHRD V3.3 *** A0A0B0P7M2_GOSAR)	0.02	Orthogroups_2024-Update
Solyc05g009430	No alias	Nuclease S1 (AHRD V3.3 *** A0A0B0MLZ3_GOSAR)	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	IEA	InterProScan predictions
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004519	endonuclease activity	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006308	DNA catabolic process	IEA	InterProScan predictions
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
BP	GO:0019439	aromatic compound catabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034655	nucleobase-containing compound catabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0044270	cellular nitrogen compound catabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0046700	heterocycle catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:1901361	organic cyclic compound catabolic process	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004097	catechol oxidase activity	IEP	Predicted GO
MF	GO:0004564	beta-fructofuranosidase activity	IEP	Predicted GO
MF	GO:0004575	sucrose alpha-glucosidase activity	IEP	Predicted GO
MF	GO:0005506	iron ion binding	IEP	Predicted GO
BP	GO:0005985	sucrose metabolic process	IEP	Predicted GO
MF	GO:0015926	glucosidase activity	IEP	Predicted GO
MF	GO:0016157	sucrose synthase activity	IEP	Predicted GO
MF	GO:0016491	oxidoreductase activity	IEP	Predicted GO
MF	GO:0016679	oxidoreductase activity, acting on diphenols and related substances as donors	IEP	Predicted GO
MF	GO:0016682	oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor	IEP	Predicted GO
MF	GO:0016705	oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen	IEP	Predicted GO
MF	GO:0016758	transferase activity, transferring hexosyl groups	IEP	Predicted GO
MF	GO:0020037	heme binding	IEP	Predicted GO
MF	GO:0043169	cation binding	IEP	Predicted GO
MF	GO:0046872	metal ion binding	IEP	Predicted GO
MF	GO:0046906	tetrapyrrole binding	IEP	Predicted GO
MF	GO:0046914	transition metal ion binding	IEP	Predicted GO
BP	GO:0055114	oxidation-reduction process	IEP	Predicted GO
MF	GO:0090599	alpha-glucosidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003154	S1/P1nuclease	24	280

External Links

No external refs found!

Bradi5g24430

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation