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  5. Sopen07g025000

Sopen07g025000


Description : Calponin homology (CH) domain


Gene families : OG_42_0001020 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001020_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g025000
Cluster HCCA clusters: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
A4A49_09912 No alias fimbrin-1 0.03 Orthogroups_2024-Update
evm.model.tig00000157.96 No alias (at2g04750 : 160.0) Actin binding Calponin homology (CH)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001715 CH-domain 396 498
IPR001715 CH-domain 270 371
IPR001715 CH-domain 518 619
IPR001715 CH-domain 155 239
No external refs found!