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  5. Sopen07g026100

Sopen07g026100


Description : SNARE domain


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen07g026100
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
A4A49_24964 No alias syntaxin-121 0.03 Orthogroups_2024-Update
At1g61290 No alias Syntaxin-124 [Source:UniProtKB/Swiss-Prot;Acc:O64791] 0.02 Orthogroups_2024-Update
At3g11820 No alias SYR1 [Source:UniProtKB/TrEMBL;Acc:A0A178VIM4] 0.02 Orthogroups_2024-Update
Bradi4g05940 No alias syntaxin of plants 131 0.03 Orthogroups_2024-Update
Brara.D00592.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
GRMZM2G029270 No alias syntaxin of plants 124 0.03 Orthogroups_2024-Update
Glyma.10G082400 No alias syntaxin of plants 121 0.04 Orthogroups_2024-Update
LOC_Os03g57310 No alias syntaxin, putative, expressed 0.02 Orthogroups_2024-Update
Potri.016G068600 No alias syntaxin of plants 121 0.02 Orthogroups_2024-Update
Pp1s300_43V6 No alias qa-sso1 syntaxin1-syp12a-group 0.02 Orthogroups_2024-Update
Pp1s98_68V6 No alias Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 0.03 Orthogroups_2024-Update
Seita.9G063400.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.02 Orthogroups_2024-Update
Sobic.001G064900.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.04 Orthogroups_2024-Update
Solyc01g006950 No alias Syntaxin, putative (AHRD V3.3 *** B9SDJ9_RICCO) 0.03 Orthogroups_2024-Update
Sopen10g032370 No alias SNARE domain 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR006011 Syntaxin_N 39 243
IPR000727 T_SNARE_dom 245 296
No external refs found!