1. Home
  2. Species
  3. Solanum pennellii
  4. Sequence
  5. Sopen08g001610

Sopen08g001610


Description : ABC-2 type transporter


Gene families : OG_42_0000429 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000429_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g001610
Cluster HCCA clusters: Cluster_68

Target Alias Description ECC score Gene Family Method Actions
A4A49_26174 No alias abc transporter g family member 14 0.03 Orthogroups_2024-Update
Bradi4g24120 No alias ATP-binding casette family G25 0.02 Orthogroups_2024-Update
Brara.B01985.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update
Brara.G03090.1 No alias subfamily ABCG transporter 0.03 Orthogroups_2024-Update
GRMZM5G813886 No alias ABC-2 type transporter family protein 0.02 Orthogroups_2024-Update
Glyma.10G205600 No alias ABC-2 type transporter family protein 0.03 Orthogroups_2024-Update
Glyma.11G090200 No alias ATP-binding cassette 14 0.04 Orthogroups_2024-Update
Kfl00050_0290 kfl00050_0290_v1.1 (at5g06530 : 526.0) ABC-2 type transporter family... 0.02 Orthogroups_2024-Update
PSME_00019170-RA No alias (at5g06530 : 722.0) ABC-2 type transporter family... 0.03 Orthogroups_2024-Update
Seita.8G055700.1 No alias subfamily ABCG transporter 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
CC GO:0016020 membrane IEA InterProScan predictions
MF GO:0016887 ATPase activity IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 394 599
IPR003439 ABC_transporter-like 88 238
No external refs found!