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  5. Sopen08g006530

Sopen08g006530


Description : Ribosomal L18ae/LX protein domain


Gene families : OG_42_0001510 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001510_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g006530
Cluster HCCA clusters: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
227198 No alias Ribosomal protein L18ae/LX family protein 0.26 Orthogroups_2024-Update
A4A49_41727 No alias 60s ribosomal protein l18a 0.18 Orthogroups_2024-Update
A4A49_56604 No alias 60s ribosomal protein l18a 0.15 Orthogroups_2024-Update
At2g34480 No alias Ribosomal protein L18ae/LX family protein... 0.05 Orthogroups_2024-Update
Bradi2g16430 No alias Ribosomal protein L18ae/LX family protein 0.31 Orthogroups_2024-Update
Bradi2g46010 No alias Ribosomal protein L18ae/LX family protein 0.25 Orthogroups_2024-Update
Bradi2g50020 No alias Ribosomal protein L18ae/LX family protein 0.13 Orthogroups_2024-Update
Brara.C01744.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.31 Orthogroups_2024-Update
Brara.C03533.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Brara.D02096.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.41 Orthogroups_2024-Update
Brara.E00977.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.33 Orthogroups_2024-Update
Brara.E02666.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.22 Orthogroups_2024-Update
Cre01.g047750 No alias Ribosomal protein L18ae/LX family protein 0.17 Orthogroups_2024-Update
GRMZM2G022619 No alias Ribosomal protein L18ae/LX family protein 0.2 Orthogroups_2024-Update
Glyma.02G284900 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
Glyma.14G029901 No alias Ribosomal protein L18ae/LX family protein 0.18 Orthogroups_2024-Update
Glyma.15G095400 No alias Ribosomal protein L18ae/LX family protein 0.11 Orthogroups_2024-Update
Glyma.18G110000 No alias Ribosomal protein L18ae/LX family protein 0.05 Orthogroups_2024-Update
HORVU1Hr1G088040.2 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.28 Orthogroups_2024-Update
HORVU3Hr1G060800.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.05 Orthogroups_2024-Update
Kfl00905_0040 kfl00905_0040_v1.1 (at2g34480 : 295.0) Ribosomal protein L18ae/LX family... 0.07 Orthogroups_2024-Update
LOC_Os01g47660 No alias 60S ribosomal protein L18a, putative, expressed 0.08 Orthogroups_2024-Update
LOC_Os05g49030 No alias 60S ribosomal protein L18a, putative, expressed 0.07 Orthogroups_2024-Update
MA_12029g0010 No alias (q943f3|rl18a_orysa : 339.0) 60S ribosomal protein L18a... 0.11 Orthogroups_2024-Update
Mp1g17730.1 No alias component RPL18a of LSU proteome component 0.19 Orthogroups_2024-Update
PSME_00023758-RA No alias (q943f3|rl18a_orysa : 335.0) 60S ribosomal protein L18a... 0.11 Orthogroups_2024-Update
Potri.002G057600 No alias Ribosomal protein L18ae/LX family protein 0.21 Orthogroups_2024-Update
Potri.004G063400 No alias Ribosomal protein L18ae/LX family protein 0.07 Orthogroups_2024-Update
Pp1s184_111V6 No alias 60s ribosomal protein l18a 0.36 Orthogroups_2024-Update
Pp1s44_13V6 No alias 60s ribosomal protein l18a 0.16 Orthogroups_2024-Update
Pp1s56_243V6 No alias 60s ribosomal protein l18a 0.13 Orthogroups_2024-Update
Pp1s74_193V6 No alias 60s ribosomal protein l18a 0.38 Orthogroups_2024-Update
Seita.3G145500.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.28 Orthogroups_2024-Update
Seita.5G262600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Seita.8G085600.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.07 Orthogroups_2024-Update
Sobic.003G249700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.32 Orthogroups_2024-Update
Sobic.005G091700.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.26 Orthogroups_2024-Update
Sobic.009G233400.1 No alias component *(eL20) of large ribosomal-subunit (LSU) proteome 0.38 Orthogroups_2024-Update
Solyc02g070640 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.52 Orthogroups_2024-Update
Solyc02g070650 No alias 60S ribosomal protein L18a (AHRD V3.3 *** Q3HRW8_SOLTU) 0.43 Orthogroups_2024-Update
Solyc06g065590 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4C7I8_SOLLC) 0.17 Orthogroups_2024-Update
Solyc08g016180 No alias 60S ribosomal protein L18a (AHRD V3.3 *** K4CJE2_SOLLC) 0.41 Orthogroups_2024-Update
Sopen02g019720 No alias Ribosomal L18ae/LX protein domain 0.05 Orthogroups_2024-Update
evm.model.contig_448.2 No alias (q943f3|rl18a_orysa : 186.0) 60S ribosomal protein L18a... 0.47 Orthogroups_2024-Update
evm.model.tig00000615.59 No alias (at1g29970 : 221.0) 60S ribosomal protein L18A-1;... 0.27 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR023573 Ribosomal_L18a//L18Ae/LX 7 128
No external refs found!