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  5. Solyc02g081320

Solyc02g081320


Description : Protein SET DOMAIN GROUP, putative (AHRD V3.3 *** B9T3H1_RICCO)


Gene families : OG_42_0006699 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006699_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g081320
Cluster HCCA clusters: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
429412 No alias SET domain group 40 0.03 Orthogroups_2024-Update
A4A49_15188 No alias protein set domain group 40 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Predicted GO
BP GO:0000077 DNA damage checkpoint IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004525 ribonuclease III activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
CC GO:0030896 checkpoint clamp complex IEP Predicted GO
BP GO:0031570 DNA integrity checkpoint IEP Predicted GO
MF GO:0032296 double-stranded RNA-specific ribonuclease activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
BP GO:0045786 negative regulation of cell cycle IEP Predicted GO
BP GO:0048519 negative regulation of biological process IEP Predicted GO
BP GO:0048523 negative regulation of cellular process IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001214 SET_dom 50 286
No external refs found!