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  5. Solyc02g081680

Solyc02g081680


Description : Nucleolar complex protein 2 like (AHRD V3.3 *** A0A0B2RJJ2_GLYSO)


Gene families : OG_42_0002326 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002326_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g081680
Cluster HCCA clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
144099 No alias Noc2p family 0.03 Orthogroups_2024-Update
A4A49_13715 No alias nucleolar complex protein 2-like protein 0.02 Orthogroups_2024-Update
At2g18220 No alias Nucleolar complex protein 2 homolog... 0.07 Orthogroups_2024-Update
At3g55510 No alias Noc2p family [Source:UniProtKB/TrEMBL;Acc:Q0WVH0] 0.1 Orthogroups_2024-Update
Bradi3g29890 No alias Noc2p family 0.1 Orthogroups_2024-Update
Bradi4g01080 No alias Noc2p family 0.09 Orthogroups_2024-Update
Brara.G00202.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.1 Orthogroups_2024-Update
Brara.I03803.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.07 Orthogroups_2024-Update
Cre09.g391652 No alias Noc2p family 0.07 Orthogroups_2024-Update
Glyma.17G186500 No alias Noc2p family 0.08 Orthogroups_2024-Update
HORVU1Hr1G043640.2 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.03 Orthogroups_2024-Update
Kfl00106_0260 kfl00106_0260_v1.1 (at2g18220 : 486.0) Noc2p family; INVOLVED IN:... 0.05 Orthogroups_2024-Update
LOC_Os12g06610 No alias nucleolar complex protein 2, putative, expressed 0.03 Orthogroups_2024-Update
Mp1g23860.1 No alias component NOC2 of ribosomal subunit nuclear export complexes 0.04 Orthogroups_2024-Update
PSME_00024185-RA No alias (at2g18220 : 557.0) Noc2p family; INVOLVED IN:... 0.02 Orthogroups_2024-Update
Potri.001G012800 No alias Noc2p family 0.04 Orthogroups_2024-Update
Potri.008G043400 No alias Noc2p family 0.05 Orthogroups_2024-Update
Pp1s18_81V6 No alias Nucleolar complex protein 2 homolog (NOC2 protein... 0.04 Orthogroups_2024-Update
Seita.4G210700.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.08 Orthogroups_2024-Update
Seita.9G206700.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.08 Orthogroups_2024-Update
Sobic.001G206500.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.09 Orthogroups_2024-Update
Sobic.005G028100.1 No alias component *(NOC2) of ribosomal-subunit proteome nuclear... 0.11 Orthogroups_2024-Update
Sopen02g026290 No alias Noc2p family 0.03 Orthogroups_2024-Update
Sopen05g018320 No alias Noc2p family 0.06 Orthogroups_2024-Update
evm.model.contig_3494.9 No alias (at2g18220 : 99.0) Noc2p family; INVOLVED IN:... 0.08 Orthogroups_2024-Update
evm.model.tig00020610.71 No alias (at2g18220 : 250.0) Noc2p family; INVOLVED IN:... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0001882 nucleoside binding IEP Predicted GO
MF GO:0001883 purine nucleoside binding IEP Predicted GO
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003735 structural constituent of ribosome IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0005198 structural molecule activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
MF GO:0005525 GTP binding IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005744 TIM23 mitochondrial import inner membrane translocase complex IEP Predicted GO
CC GO:0005840 ribosome IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006412 translation IEP Predicted GO
BP GO:0006518 peptide metabolic process IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006839 mitochondrial transport IEP Predicted GO
MF GO:0008097 5S rRNA binding IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009059 macromolecule biosynthetic process IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019001 guanyl nucleotide binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0030150 protein import into mitochondrial matrix IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
MF GO:0032549 ribonucleoside binding IEP Predicted GO
MF GO:0032550 purine ribonucleoside binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0032561 guanyl ribonucleotide binding IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034645 cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0043043 peptide biosynthetic process IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043228 non-membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0043232 intracellular non-membrane-bounded organelle IEP Predicted GO
BP GO:0043603 cellular amide metabolic process IEP Predicted GO
BP GO:0043604 amide biosynthetic process IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0044249 cellular biosynthetic process IEP Predicted GO
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0044743 protein transmembrane import into intracellular organelle IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0065002 intracellular protein transmembrane transport IEP Predicted GO
BP GO:0070585 protein localization to mitochondrion IEP Predicted GO
BP GO:0071806 protein transmembrane transport IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072655 establishment of protein localization to mitochondrion IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1901566 organonitrogen compound biosynthetic process IEP Predicted GO
BP GO:1901576 organic substance biosynthetic process IEP Predicted GO
BP GO:1990542 mitochondrial transmembrane transport IEP Predicted GO
CC GO:1990904 ribonucleoprotein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR005343 Noc2 176 489
No external refs found!