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  5. Sopen08g023160

Sopen08g023160


Description : tRNA synthetase class II core domain (G, H, P, S and T)


Gene families : OG_42_0001645 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001645_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Sopen08g023160
Cluster HCCA clusters: Cluster_110

Target Alias Description ECC score Gene Family Method Actions
Bradi3g19960 No alias Threonyl-tRNA synthetase 0.02 Orthogroups_2024-Update
HORVU3Hr1G012410.6 No alias EC_6.1 ligase forming carbon-oxygen bond & threonine-tRNA ligase 0.02 Orthogroups_2024-Update
Solyc08g074550 No alias Threonyl-tRNA synthetase (AHRD V3.3 *** AT5G26830.1) 0.02 Orthogroups_2024-Update
evm.model.tig00000169.10 No alias (at2g04842 : 755.0) Encodes a dual localized... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA InterProScan predictions
MF GO:0004812 aminoacyl-tRNA ligase activity IEA InterProScan predictions
MF GO:0005524 ATP binding IEA InterProScan predictions
BP GO:0006418 tRNA aminoacylation for protein translation IEA InterProScan predictions
BP GO:0043039 tRNA aminoacylation IEA InterProScan predictions
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR012947 tRNA_SAD 210 259
IPR004095 TGS 42 102
IPR004154 Anticodon-bd 581 669
IPR002314 aa-tRNA-synt_IIb 360 568
No external refs found!