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  5. Solyc02g082880

Solyc02g082880


Description : AMP-dependent synthetase and ligase family protein (AHRD V3.3 *** AT2G17650.1)


Gene families : OG_42_0000233 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000233_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Solanum release: Solyc02g082880
Cluster HCCA clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_12901 No alias putative acyl-activating enzyme 6 0.02 Orthogroups_2024-Update
At1g65880 No alias Benzoate--CoA ligase, peroxisomal... 0.03 Orthogroups_2024-Update
At1g77240 No alias AAE2 [Source:UniProtKB/TrEMBL;Acc:A0A178WCK9] 0.03 Orthogroups_2024-Update
Bradi5g26000 No alias acyl activating enzyme 5 0.02 Orthogroups_2024-Update
Glyma.02G042200 No alias AMP-dependent synthetase and ligase family protein 0.03 Orthogroups_2024-Update
Glyma.14G208200 No alias AMP-dependent synthetase and ligase family protein 0.02 Orthogroups_2024-Update
LOC_Os03g19240 No alias AMP-binding enzyme, putative, expressed 0.02 Orthogroups_2024-Update
MA_112757g0010 No alias (at3g16910 : 813.0) Encodes a peroxisomal protein with... 0.03 Orthogroups_2024-Update
MA_3754g0010 No alias (at5g16370 : 413.0) acyl activating enzyme 5 (AAE5);... 0.03 Orthogroups_2024-Update
PSME_00028232-RA No alias (at5g16370 : 655.0) acyl activating enzyme 5 (AAE5);... 0.03 Orthogroups_2024-Update
Potri.T116500 No alias benzoyloxyglucosinolate 1 0.03 Orthogroups_2024-Update
Pp1s7_313V6 No alias amp dependent 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA InterProScan predictions
BP GO:0008152 metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
CC GO:0016020 membrane IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0016887 ATPase activity IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR025110 AMP-bd_C 502 576
IPR000873 AMP-dep_Synth/Lig 69 493
No external refs found!