Sopen08g024560

Description : Ring finger domain

Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g024560
Cluster	HCCA clusters: Cluster_207

Target	Alias	Description	ECC score	Gene Family Method
GRMZM2G122848	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
GRMZM2G336761	No alias	RING/U-box superfamily protein	0.02	Orthogroups_2024-Update
HORVU6Hr1G034800.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
MA_10267109g0010	No alias	no hits & (original description: no original description)	0.02	Orthogroups_2024-Update
MA_474338g0010	No alias	(at2g39720 : 83.2) Encodes a putative RING-H2 finger...	0.02	Orthogroups_2024-Update
PSME_00032072-RA	No alias	(at3g56580 : 108.0) RING/U-box superfamily protein;...	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
MF	GO:0061630	ubiquitin protein ligase activity	IEA	InterProScan predictions
MF	GO:0061659	ubiquitin-like protein ligase activity	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR039525	RNF126-like_zinc-ribbon	7	37
IPR001841	Znf_RING	174	216

External Links

No external refs found!