Sopen08g029320

Description : JmjC domain, hydroxylase

Gene families : OG_42_0007370 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007370_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Solanum release: Sopen08g029320
Cluster	HCCA clusters: Cluster_25

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR004198	Znf_C5HC2	627	679
IPR003349	JmjN	32	65
IPR013637	Lys_sp_deMease-like_dom	893	1186
IPR013637	Lys_sp_deMease-like_dom	1146	1410
IPR019787	Znf_PHD-finger	247	294
IPR001606	ARID_dom	107	188
IPR003347	JmjC_dom	418	534

External Links

No external refs found!