Description : ABC transporter family protein
Gene families : OG_42_0000040 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000040_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.01G008200 | |
Cluster | HCCA clusters: Cluster_432 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
At1g27940 | No alias | PGP13 [Source:UniProtKB/TrEMBL;Acc:A0A178W4F4] | 0.03 | Orthogroups_2024-Update | |
Bradi3g17010 | No alias | P-glycoprotein 14 | 0.03 | Orthogroups_2024-Update | |
Brara.I02993.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
GRMZM5G833207 | No alias | ATP binding cassette subfamily B4 | 0.03 | Orthogroups_2024-Update | |
LOC_Os01g34970 | No alias | MDR-like ABC transporter, putative, expressed | 0.03 | Orthogroups_2024-Update | |
LOC_Os04g54930 | No alias | ABC transporter, ATP-binding protein, putative, expressed | 0.02 | Orthogroups_2024-Update | |
PSME_00035518-RA | No alias | (at2g39480 : 1505.0) P-glycoprotein 6 (PGP6); FUNCTIONS... | 0.02 | Orthogroups_2024-Update | |
Pp1s29_108V6 | No alias | multidrug pheromone mdr abc transporter family | 0.02 | Orthogroups_2024-Update | |
Seita.5G302200.1 | No alias | subfamily ABCB transporter | 0.03 | Orthogroups_2024-Update | |
Sopen02g032590 | No alias | ABC transporter transmembrane region | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005524 | ATP binding | IEA | InterProScan predictions |
CC | GO:0016021 | integral component of membrane | IEA | InterProScan predictions |
MF | GO:0016887 | ATPase activity | IEA | InterProScan predictions |
MF | GO:0042626 | ATPase activity, coupled to transmembrane movement of substances | IEA | InterProScan predictions |
BP | GO:0055085 | transmembrane transport | IEA | InterProScan predictions |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | Predicted GO |
MF | GO:0004674 | protein serine/threonine kinase activity | IEP | Predicted GO |
CC | GO:0005730 | nucleolus | IEP | Predicted GO |
BP | GO:0006364 | rRNA processing | IEP | Predicted GO |
BP | GO:0006629 | lipid metabolic process | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006644 | phospholipid metabolic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0008759 | UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity | IEP | Predicted GO |
BP | GO:0009245 | lipid A biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0009311 | oligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:0009312 | oligosaccharide biosynthetic process | IEP | Predicted GO |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Predicted GO |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Predicted GO |
BP | GO:0016072 | rRNA metabolic process | IEP | Predicted GO |
MF | GO:0016810 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds | IEP | Predicted GO |
MF | GO:0016811 | hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | IEP | Predicted GO |
MF | GO:0019213 | deacetylase activity | IEP | Predicted GO |
BP | GO:0030490 | maturation of SSU-rRNA | IEP | Predicted GO |
CC | GO:0030684 | preribosome | IEP | Predicted GO |
CC | GO:0030686 | 90S preribosome | IEP | Predicted GO |
CC | GO:0030688 | preribosome, small subunit precursor | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046493 | lipid A metabolic process | IEP | Predicted GO |
BP | GO:1901269 | lipooligosaccharide metabolic process | IEP | Predicted GO |
BP | GO:1901271 | lipooligosaccharide biosynthetic process | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
No external refs found! |