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  5. Glyma.02G009300

Glyma.02G009300


Description : Pectin lyase-like superfamily protein


Gene families : OG_42_0002108 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002108_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G009300
Cluster HCCA clusters: Cluster_394

Target Alias Description ECC score Gene Family Method Actions
At1g48100 No alias Polygalacturonase At1g48100... 0.04 Orthogroups_2024-Update
GRMZM2G170388 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G087900 No alias Pectin lyase-like superfamily protein 0.06 Orthogroups_2024-Update
Glyma.09G031600 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Sopen04g003350 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0004402 histone acetyltransferase activity IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008080 N-acetyltransferase activity IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016410 N-acyltransferase activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0034212 peptide N-acetyltransferase activity IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
MF GO:0061733 peptide-lysine-N-acetyltransferase activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 110 426
No external refs found!