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  5. Glyma.02G069700

Glyma.02G069700


Description : syntaxin of plants 111


Gene families : OG_42_0000336 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000336_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G069700
Cluster HCCA clusters: Cluster_235

Target Alias Description ECC score Gene Family Method Actions
A4A49_06568 No alias syntaxin-related protein knolle 0.05 Orthogroups_2024-Update
At1g08560 No alias SYP111 [Source:UniProtKB/TrEMBL;Acc:A0A178WAC8] 0.06 Orthogroups_2024-Update
Brara.F00536.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.06 Orthogroups_2024-Update
Brara.H02867.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.05 Orthogroups_2024-Update
GRMZM2G131525 No alias syntaxin of plants 111 0.02 Orthogroups_2024-Update
HORVU4Hr1G011180.1 No alias Qa-type component *(KNOLLE) of SNARE cell-plate vesicle... 0.03 Orthogroups_2024-Update
Mp4g20670.1 No alias SYP1-group Qa-type SNARE component 0.03 Orthogroups_2024-Update
Mp6g00050.1 No alias SYP1-group Qa-type SNARE component 0.03 Orthogroups_2024-Update
Potri.019G030800 No alias syntaxin of plants 111 0.05 Orthogroups_2024-Update
Pp1s59_154V6 No alias Qa-SNARE, Sso1/Syntaxin1-type, SYP12A-group 0.03 Orthogroups_2024-Update
Seita.1G039700.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Sobic.010G177500.1 No alias Qa-type SYP1-group component of SNARE membrane fusion complex 0.03 Orthogroups_2024-Update
Solyc01g109750 No alias Syntaxin, putative (AHRD V3.3 *** B9RH57_RICCO) 0.03 Orthogroups_2024-Update
Solyc06g053760 No alias Syntaxin, putative (AHRD V3.3 *** B9SHK3_RICCO) 0.1 Orthogroups_2024-Update
Sopen06g018880 No alias SNARE domain 0.08 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
CC GO:0005634 nucleus IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005789 endoplasmic reticulum membrane IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006497 protein lipidation IEP Predicted GO
BP GO:0006505 GPI anchor metabolic process IEP Predicted GO
BP GO:0006506 GPI anchor biosynthetic process IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006661 phosphatidylinositol biosynthetic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046474 glycerophospholipid biosynthetic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000727 T_SNARE_dom 258 308
IPR006011 Syntaxin_N 50 255
No external refs found!