Glyma.02G281700


Description : auxin response factor 6


Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.02G281700
Cluster HCCA clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
117217 No alias auxin response factor 6 0.02 Orthogroups_2024-Update
At1g19850 No alias Auxin response factor [Source:UniProtKB/TrEMBL;Acc:A0A178W993] 0.03 Orthogroups_2024-Update
At5g62000 No alias Auxin response factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q94JM3] 0.04 Orthogroups_2024-Update
Bradi1g34340 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Bradi3g40437 No alias Transcriptional factor B3 family protein /... 0.03 Orthogroups_2024-Update
Bradi3g45880 No alias auxin response factor 1 0.03 Orthogroups_2024-Update
Bradi4g01730 No alias auxin response factor 8 0.03 Orthogroups_2024-Update
Bradi4g07470 No alias auxin response factor 2 0.03 Orthogroups_2024-Update
Brara.D02066.1 No alias ARF-type transcription factor 0.03 Orthogroups_2024-Update
Glyma.01G103500 No alias auxin response factor 9 0.04 Orthogroups_2024-Update
Glyma.05G200800 No alias auxin response factor 2 0.05 Orthogroups_2024-Update
Glyma.09G072200 No alias Transcriptional factor B3 family protein /... 0.02 Orthogroups_2024-Update
Glyma.15G181000 No alias auxin response factor 19 0.02 Orthogroups_2024-Update
Glyma.19G181900 No alias auxin response factor 16 0.03 Orthogroups_2024-Update
HORVU7Hr1G106280.1 No alias ARF-type transcription factor 0.02 Orthogroups_2024-Update
Pp1s14_392V6 No alias arf1-binding protein 0.03 Orthogroups_2024-Update
Pp1s163_119V6 No alias auxin response 0.02 Orthogroups_2024-Update
Pp1s6_240V6 No alias auxin response 0.02 Orthogroups_2024-Update
Solyc03g031970 No alias Auxin response factor (AHRD V3.3 *** A0A191T8S7_SALMI) 0.02 Orthogroups_2024-Update
evm.model.tig00020904.93 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA InterProScan predictions
CC GO:0005634 nucleus IEA InterProScan predictions
BP GO:0006355 regulation of transcription, DNA-templated IEA InterProScan predictions
BP GO:0009725 response to hormone IEA InterProScan predictions
Type GO Term Name Evidence Source
MF GO:0003756 protein disulfide isomerase activity IEP Predicted GO
MF GO:0004478 methionine adenosyltransferase activity IEP Predicted GO
MF GO:0004559 alpha-mannosidase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005801 cis-Golgi network IEP Predicted GO
BP GO:0006013 mannose metabolic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006351 transcription, DNA-templated IEP Predicted GO
BP GO:0006556 S-adenosylmethionine biosynthetic process IEP Predicted GO
BP GO:0006612 protein targeting to membrane IEP Predicted GO
BP GO:0006613 cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006790 sulfur compound metabolic process IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006904 vesicle docking involved in exocytosis IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
MF GO:0008312 7S RNA binding IEP Predicted GO
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015672 monovalent inorganic cation transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
MF GO:0015923 mannosidase activity IEP Predicted GO
BP GO:0016042 lipid catabolic process IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016226 iron-sulfur cluster assembly IEP Predicted GO
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016864 intramolecular oxidoreductase activity, transposing S-S bonds IEP Predicted GO
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP Predicted GO
BP GO:0018130 heterocycle biosynthetic process IEP Predicted GO
BP GO:0019438 aromatic compound biosynthetic process IEP Predicted GO
BP GO:0022406 membrane docking IEP Predicted GO
CC GO:0030119 AP-type membrane coat adaptor complex IEP Predicted GO
CC GO:0030131 clathrin adaptor complex IEP Predicted GO
BP GO:0031163 metallo-sulfur cluster assembly IEP Predicted GO
BP GO:0032774 RNA biosynthetic process IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
CC GO:0033179 proton-transporting V-type ATPase, V0 domain IEP Predicted GO
BP GO:0034220 ion transmembrane transport IEP Predicted GO
BP GO:0034654 nucleobase-containing compound biosynthetic process IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
BP GO:0045047 protein targeting to ER IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0046500 S-adenosylmethionine metabolic process IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048278 vesicle docking IEP Predicted GO
CC GO:0048500 signal recognition particle IEP Predicted GO
BP GO:0051640 organelle localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0070972 protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Predicted GO
BP GO:0072657 protein localization to membrane IEP Predicted GO
BP GO:0090150 establishment of protein localization to membrane IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
BP GO:0097659 nucleic acid-templated transcription IEP Predicted GO
BP GO:0098655 cation transmembrane transport IEP Predicted GO
BP GO:0098660 inorganic ion transmembrane transport IEP Predicted GO
BP GO:0098662 inorganic cation transmembrane transport IEP Predicted GO
BP GO:0140029 exocytic process IEP Predicted GO
BP GO:0140056 organelle localization by membrane tethering IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
BP GO:1901362 organic cyclic compound biosynthetic process IEP Predicted GO
BP GO:1902600 proton transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR010525 Auxin_resp 255 338
IPR003340 B3_DNA-bd 129 230
IPR033389 AUX/IAA_dom 752 844
No external refs found!