Glyma.03G162400

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.03G162400
Cluster	HCCA clusters: Cluster_542

Target	Alias	Description	ECC score	Gene Family Method
A4A49_36835	No alias	ethylene-responsive transcription factor 5	0.03	Orthogroups_2024-Update
A4A49_39806	No alias	ethylene-responsive transcription factor erf119	0.04	Orthogroups_2024-Update
At1g28370	No alias	ERF domain protein 11 [Source:TAIR;Acc:AT1G28370]	0.03	Orthogroups_2024-Update
At5g25810	No alias	Tny [Source:UniProtKB/TrEMBL;Acc:A0A178URN2]	0.03	Orthogroups_2024-Update
Bradi1g72449	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi2g60331	No alias	C-repeat/DRE binding factor 1	0.02	Orthogroups_2024-Update
Brara.F00821.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.H00147.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.H02647.1	No alias	subgroup ERF-III transcription factor	0.01	Orthogroups_2024-Update
Brara.I00528.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.K00056.1	No alias	transcription factor *(CRF) & subgroup ERF-VI...	0.03	Orthogroups_2024-Update
GRMZM2G137341	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
Glyma.01G206600	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.03G116700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.05G157400	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.06G163700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.08G145300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.11G053600	No alias	DREB and EAR motif protein 2	0.02	Orthogroups_2024-Update
Glyma.12G203100	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.13G040400	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Glyma.13G081600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G122500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G236500	No alias	erf domain protein 9	0.02	Orthogroups_2024-Update
Glyma.13G236600	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Glyma.16G046300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.17G124100	No alias	related to AP2 11	0.03	Orthogroups_2024-Update
Glyma.17G219700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.01	Orthogroups_2024-Update
Glyma.20G172800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.20G203500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
HORVU1Hr1G082310.1	No alias	subgroup ERF-X transcription factor	0.02	Orthogroups_2024-Update
LOC_Os01g58420	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os04g52090	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
PSME_00009547-RA	No alias	(at4g17500 : 103.0) Encodes a member of the ERF...	0.02	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.01	Orthogroups_2024-Update
Potri.008G215600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.05	Orthogroups_2024-Update
Potri.019G073300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s132_34V6	No alias	transcriptional factor	0.02	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.01	Orthogroups_2024-Update
Pp1s31_112V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Pp1s6_75V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G259200.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
Seita.2G280400.1	No alias	Unknown function	0.02	Orthogroups_2024-Update
Seita.2G364700.1	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.03	Orthogroups_2024-Update
Seita.7G188500.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G225700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G269100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G283201.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.004G308900.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.006G184800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.007G156700.1	No alias	subgroup ERF-X transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G111200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.010G016500.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc02g093130	No alias	AP2/EREBP transcription factor_1	0.03	Orthogroups_2024-Update
Solyc03g026280	No alias	CBF	0.02	Orthogroups_2024-Update
Solyc03g093560	No alias	ethylene response factor C.6	0.04	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.04	Orthogroups_2024-Update
Solyc04g051360	No alias	Ethylene Response Factor D.1	0.02	Orthogroups_2024-Update
Solyc09g066360	No alias	Ethylene Response Factor C.3	0.03	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen10g008890	No alias	AP2 domain	0.02	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004190	aspartic-type endopeptidase activity	IEP	Predicted GO
BP	GO:0009143	nucleoside triphosphate catabolic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0010215	cellulose microfibril organization	IEP	Predicted GO
BP	GO:0016049	cell growth	IEP	Predicted GO
BP	GO:0030198	extracellular matrix organization	IEP	Predicted GO
CC	GO:0031225	anchored component of membrane	IEP	Predicted GO
BP	GO:0040007	growth	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
BP	GO:0043062	extracellular structure organization	IEP	Predicted GO
MF	GO:0047429	nucleoside-triphosphate diphosphatase activity	IEP	Predicted GO
BP	GO:0050896	response to stimulus	IEP	Predicted GO
MF	GO:0061630	ubiquitin protein ligase activity	IEP	Predicted GO
MF	GO:0061659	ubiquitin-like protein ligase activity	IEP	Predicted GO
MF	GO:0070001	aspartic-type peptidase activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	18	45

External Links

No external refs found!

Glyma.03G162400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation