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  5. Glyma.04G113500

Glyma.04G113500


Description : FAD-binding Berberine family protein


Gene families : OG_42_0000069 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000069_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.04G113500
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_16806 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
A4A49_37478 No alias flavin-dependent oxidoreductase fox2 0.03 Orthogroups_2024-Update
Bradi3g09380 No alias FAD-binding Berberine family protein 0.02 Orthogroups_2024-Update
Brara.G01552.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Glyma.15G133200 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
HORVU1Hr1G091500.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
HORVU7Hr1G026630.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
LOC_Os01g18230 No alias FAD-linked oxidoreductase protein, putative, expressed 0.02 Orthogroups_2024-Update
PSME_00033063-RA No alias (at5g44360 : 384.0) FAD-binding Berberine family... 0.03 Orthogroups_2024-Update
Potri.001G440700 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.001G462800 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G158400 No alias FAD-binding Berberine family protein 0.03 Orthogroups_2024-Update
Potri.011G162732 No alias FAD-binding Berberine family protein 0.04 Orthogroups_2024-Update
Seita.4G178200.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Seita.6G055100.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.006G056300.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.03 Orthogroups_2024-Update
Sobic.010G162700.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.04 Orthogroups_2024-Update
Sobic.010G162900.1 No alias EC_1.1 oxidoreductase acting on CH-OH group of donor 0.02 Orthogroups_2024-Update
Solyc02g070070 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT2G34790.1) 0.03 Orthogroups_2024-Update
Solyc02g079450 No alias FAD-binding Berberine family protein (AHRD V3.3 *** AT5G44360.2) 0.03 Orthogroups_2024-Update
Sopen02g019250 No alias Berberine and berberine like 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEA InterProScan predictions
MF GO:0050660 flavin adenine dinucleotide binding IEA InterProScan predictions
BP GO:0055114 oxidation-reduction process IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR006094 Oxid_FAD_bind_N 78 213
IPR012951 BBE 464 521
No external refs found!