Glyma.04G217400

Description : Integrase-type DNA-binding superfamily protein

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.04G217400
Cluster	HCCA clusters: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03202	No alias	ethylene-responsive transcription factor erf053	0.03	Orthogroups_2024-Update
A4A49_16244	No alias	ethylene-responsive transcription factor rap2-11	0.03	Orthogroups_2024-Update
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_40581	No alias	ethylene-responsive transcription factor erf106	0.04	Orthogroups_2024-Update
At1g21910	No alias	DREB26 [Source:UniProtKB/TrEMBL;Acc:A0A178W3Q9]	0.04	Orthogroups_2024-Update
At1g72360	No alias	Integrase-type DNA-binding superfamily protein...	0.03	Orthogroups_2024-Update
At5g51190	No alias	Ethylene-responsive transcription factor ERF105...	0.03	Orthogroups_2024-Update
At5g61590	No alias	Ethylene-responsive transcription factor ERF107...	0.04	Orthogroups_2024-Update
Bradi3g24000	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Bradi5g17640	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Brara.A01788.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.B02236.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.C00211.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.C00832.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.D02449.1	No alias	subgroup ERF-IV/DREB2 transcription factor	0.03	Orthogroups_2024-Update
Brara.G03053.1	No alias	subgroup ERF-II transcription factor *(ERF19/20)	0.03	Orthogroups_2024-Update
Brara.I01208.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I01326.1	No alias	subgroup ERF-I transcription factor	0.04	Orthogroups_2024-Update
Brara.I02949.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Brara.I03383.1	No alias	subgroup ERF-II-DEAR transcription factor	0.03	Orthogroups_2024-Update
Brara.I05105.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Brara.I05601.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.J02098.1	No alias	subgroup ERF-X transcription factor	0.04	Orthogroups_2024-Update
Brara.K01035.1	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Glyma.07G025800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.07G114000	No alias	ethylene-responsive element binding factor 13	0.06	Orthogroups_2024-Update
Glyma.07G244867	No alias	ethylene-responsive element binding protein	0.04	Orthogroups_2024-Update
Glyma.08G320700	No alias	ethylene responsive element binding factor 3	0.03	Orthogroups_2024-Update
Glyma.10G036600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G194200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G239400	No alias	C-repeat-binding factor 4	0.03	Orthogroups_2024-Update
Glyma.11G036500	No alias	ethylene responsive element binding factor 1	0.03	Orthogroups_2024-Update
Glyma.14G057900	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.15G077000	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Glyma.16G164800	No alias	Integrase-type DNA-binding superfamily protein	0.08	Orthogroups_2024-Update
Glyma.17G210500	No alias	Integrase-type DNA-binding superfamily protein	0.05	Orthogroups_2024-Update
Glyma.18G018200	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
HORVU6Hr1G090800.2	No alias	transcription factor *(ERN1) & subgroup ERF-V...	0.02	Orthogroups_2024-Update
HORVU7Hr1G088790.1	No alias	subgroup ERF-III transcription factor	0.02	Orthogroups_2024-Update
LOC_Os02g34260	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
LOC_Os02g43790	No alias	ethylene-responsive transcription factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os03g60120	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os06g08340	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os08g43210	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os12g41060	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_10433310g0010	No alias	(at5g11590 : 108.0) encodes a member of the DREB...	0.04	Orthogroups_2024-Update
MA_12547g0010	No alias	(at5g25810 : 85.9) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_33394g0020	No alias	no hits & (original description: no original description)	0.03	Orthogroups_2024-Update
MA_4032g0010	No alias	(q9sxs8\|erf3_tobac : 85.1) Ethylene-responsive...	0.03	Orthogroups_2024-Update
MA_40338g0010	No alias	(at1g21910 : 84.7) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_426919g0020	No alias	(at1g19210 : 104.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_65877g0010	No alias	(at3g16280 : 101.0) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_67841g0010	No alias	(at2g44940 : 151.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00039617-RA	No alias	(at4g17500 : 120.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00052064-RA	No alias	(at5g21960 : 132.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
PSME_00056166-RA	No alias	(at5g11590 : 103.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
Potri.001G079800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G039000	No alias	ethylene response factor 1	0.04	Orthogroups_2024-Update
Potri.002G141200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.004G187001	No alias	C-repeat/DRE binding factor 2	0.03	Orthogroups_2024-Update
Potri.005G168700	No alias	related to AP2 4	0.03	Orthogroups_2024-Update
Potri.006G138800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.008G215600	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.011G056900	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.014G055700	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G085700	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.018G131400	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.019G131300	No alias	cytokinin response factor 4	0.03	Orthogroups_2024-Update
Pp1s121_50V6	No alias	ap2 erf domain-containing transcription factor	0.03	Orthogroups_2024-Update
Pp1s276_72V6	No alias	ap2 erf domain-containing transcription factor	0.02	Orthogroups_2024-Update
Seita.1G257300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Seita.8G098100.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.9G320700.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Seita.9G455400.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.001G473900.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Sobic.002G115400.1	No alias	Unknown function	0.04	Orthogroups_2024-Update
Sobic.002G260800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Sobic.005G087600.2	No alias	subgroup ERF-III transcription factor	0.03	Orthogroups_2024-Update
Sobic.005G103000.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.009G111200.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Solyc02g093130	No alias	AP2/EREBP transcription factor_1	0.04	Orthogroups_2024-Update
Solyc04g012050	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Solyc04g054910	No alias	Ethylene-responsive element binding-factor (AHRD V3.3...	0.03	Orthogroups_2024-Update
Solyc04g071770	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.03	Orthogroups_2024-Update
Solyc05g052030	No alias	ethylene response factor 4	0.05	Orthogroups_2024-Update
Solyc06g051840	No alias	Solanum lycopersicum Cytokinin Response Factor 6	0.03	Orthogroups_2024-Update
Solyc07g054220	No alias	Ethylene-responsive transcription factor ERF053 (AHRD...	0.03	Orthogroups_2024-Update
Solyc07g064890	No alias	Ethylene Response Factor F.2	0.03	Orthogroups_2024-Update
Solyc08g007230	No alias	Ethylene-responsive transcription factor (AHRD V3.3 ***...	0.04	Orthogroups_2024-Update
Sopen02g037700	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen04g027740	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen05g030960	No alias	AP2 domain	0.03	Orthogroups_2024-Update
Sopen09g030200	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003743	translation initiation factor activity	IEP	Predicted GO
BP	GO:0006413	translational initiation	IEP	Predicted GO
BP	GO:0006643	membrane lipid metabolic process	IEP	Predicted GO
BP	GO:0006664	glycolipid metabolic process	IEP	Predicted GO
BP	GO:0008654	phospholipid biosynthetic process	IEP	Predicted GO
MF	GO:0008759	UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase activity	IEP	Predicted GO
BP	GO:0009245	lipid A biosynthetic process	IEP	Predicted GO
BP	GO:0009247	glycolipid biosynthetic process	IEP	Predicted GO
BP	GO:0009312	oligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:0009719	response to endogenous stimulus	IEP	Predicted GO
BP	GO:0009725	response to hormone	IEP	Predicted GO
BP	GO:0009733	response to auxin	IEP	Predicted GO
BP	GO:0010033	response to organic substance	IEP	Predicted GO
BP	GO:0016226	iron-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0016255	attachment of GPI anchor to protein	IEP	Predicted GO
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	Predicted GO
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	Predicted GO
MF	GO:0019213	deacetylase activity	IEP	Predicted GO
BP	GO:0031163	metallo-sulfur cluster assembly	IEP	Predicted GO
BP	GO:0042221	response to chemical	IEP	Predicted GO
CC	GO:0042765	GPI-anchor transamidase complex	IEP	Predicted GO
BP	GO:0046467	membrane lipid biosynthetic process	IEP	Predicted GO
BP	GO:0046493	lipid A metabolic process	IEP	Predicted GO
BP	GO:1901269	lipooligosaccharide metabolic process	IEP	Predicted GO
BP	GO:1901271	lipooligosaccharide biosynthetic process	IEP	Predicted GO
BP	GO:1903509	liposaccharide metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	135	184

External Links

No external refs found!

Glyma.04G217400

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation