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  5. Glyma.05G068000

Glyma.05G068000


Description : chloroplast beta-amylase


Gene families : OG_42_0000277 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000277_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G068000
Cluster HCCA clusters: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
At4g00490 No alias Beta-amylase 2, chloroplastic... 0.04 Orthogroups_2024-Update
At4g17090 No alias Beta-amylase 3, chloroplastic... 0.03 Orthogroups_2024-Update
At5g18670 No alias Inactive beta-amylase 9 [Source:UniProtKB/Swiss-Prot;Acc:Q8VYW2] 0.03 Orthogroups_2024-Update
Bradi1g25447 No alias beta-amylase 5 0.02 Orthogroups_2024-Update
Brara.G00610.1 No alias EC_3.2 glycosylase & beta amylase 0.03 Orthogroups_2024-Update
Brara.J01703.1 No alias beta amylase & EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
GRMZM2G007939 No alias chloroplast beta-amylase 0.05 Orthogroups_2024-Update
GRMZM2G058310 No alias beta-amylase 5 0.02 Orthogroups_2024-Update
GRMZM2G077202 No alias chloroplast beta-amylase 0.03 Orthogroups_2024-Update
GRMZM2G175218 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
HORVU4Hr1G000520.1 No alias beta amylase & EC_3.2 glycosylase 0.03 Orthogroups_2024-Update
Kfl00034_0040 kfl00034_0040_v1.1 (at3g23920 : 514.0) Encodes a chloroplast beta-amylase.... 0.02 Orthogroups_2024-Update
LOC_Os03g04770 No alias beta-amylase, putative, expressed 0.04 Orthogroups_2024-Update
MA_124514g0010 No alias (at3g23920 : 732.0) Encodes a chloroplast beta-amylase.... 0.03 Orthogroups_2024-Update
MA_21789g0010 No alias (at5g18670 : 421.0) putative beta-amylase BMY3 (BMY3);... 0.04 Orthogroups_2024-Update
Mp4g04500.1 No alias beta amylase 0.03 Orthogroups_2024-Update
Potri.001G087600 No alias beta-amylase 1 0.03 Orthogroups_2024-Update
Pp1s233_4V6 No alias F14O13.12; beta-amylase, putative / 1,4-alpha-D-glucan... 0.03 Orthogroups_2024-Update
Sobic.002G329500.1 No alias EC_3.2 glycosylase & beta amylase 0.04 Orthogroups_2024-Update
Solyc01g067660 No alias 1,4-alpha-glucan-maltohydrolase 0.03 Orthogroups_2024-Update
Sopen01g029610 No alias Glycosyl hydrolase family 14 0.03 Orthogroups_2024-Update
Sopen08g003080 No alias Glycosyl hydrolase family 14 0.03 Orthogroups_2024-Update
evm.model.contig_4446.9 No alias (at3g23920 : 287.0) Encodes a chloroplast beta-amylase.... 0.01 Orthogroups_2024-Update
evm.model.tig00000254.59 No alias (p16098|amyb_horvu : 219.0) Beta-amylase (EC 3.2.1.2)... 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA InterProScan predictions
MF GO:0016161 beta-amylase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003905 alkylbase DNA N-glycosylase activity IEP Predicted GO
MF GO:0004176 ATP-dependent peptidase activity IEP Predicted GO
MF GO:0004366 glycerol-3-phosphate O-acyltransferase activity IEP Predicted GO
MF GO:0005542 folic acid binding IEP Predicted GO
CC GO:0005576 extracellular region IEP Predicted GO
CC GO:0005618 cell wall IEP Predicted GO
BP GO:0006073 cellular glucan metabolic process IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006771 riboflavin metabolic process IEP Predicted GO
MF GO:0008686 3,4-dihydroxy-2-butanone-4-phosphate synthase activity IEP Predicted GO
MF GO:0008725 DNA-3-methyladenine glycosylase activity IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009231 riboflavin biosynthetic process IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Predicted GO
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
CC GO:0030312 external encapsulating structure IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
BP GO:0032259 methylation IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0042726 flavin-containing compound metabolic process IEP Predicted GO
BP GO:0042727 flavin-containing compound biosynthetic process IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0043733 DNA-3-methylbase glycosylase activity IEP Predicted GO
BP GO:0044042 glucan metabolic process IEP Predicted GO
BP GO:0044264 cellular polysaccharide metabolic process IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
MF GO:0046527 glucosyltransferase activity IEP Predicted GO
CC GO:0048046 apoplast IEP Predicted GO
MF GO:0052689 carboxylic ester hydrolase activity IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
MF GO:0072341 modified amino acid binding IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 88 505
No external refs found!