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  5. Glyma.05G182000

Glyma.05G182000


Description : RING-H2 finger A2A


Gene families : OG_42_0000206 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000206_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G182000
Cluster HCCA clusters: Cluster_79

Target Alias Description ECC score Gene Family Method Actions
A4A49_31337 No alias e3 ubiquitin-protein ligase rha2a 0.03 Orthogroups_2024-Update
A4A49_36602 No alias putative e3 ubiquitin-protein ligase xerico 0.04 Orthogroups_2024-Update
Bradi5g19180 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
Brara.D00103.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Brara.D01801.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.I02341.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Glyma.01G093800 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.08G139700 No alias RING-H2 finger A2A 0.06 Orthogroups_2024-Update
Glyma.11G079900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G034100 No alias brassinosteroid-responsive RING-H2 0.04 Orthogroups_2024-Update
HORVU3Hr1G037450.1 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g48680 No alias zinc finger, C3HC4 type domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_10023352g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_169947g0010 No alias (at3g61460 : 156.0) Encodes a novel ring finger protein... 0.04 Orthogroups_2024-Update
MA_447489g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_4795437g0010 No alias (at3g43430 : 102.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
MA_711804g0010 No alias (at3g43430 : 92.4) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
Potri.003G130900 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G086100 No alias receptor homology region transmembrane domain ring H2... 0.03 Orthogroups_2024-Update
Potri.007G086200 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Potri.014G087700 No alias brassinosteroid-responsive RING-H2 0.03 Orthogroups_2024-Update
Potri.014G170400 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Seita.1G273100.1 No alias E3 ubiquitin ligase *(BRH) 0.03 Orthogroups_2024-Update
Solyc07g045190 No alias RING/U-box superfamily protein, putative (AHRD V3.3 ***... 0.04 Orthogroups_2024-Update
Sopen07g023740 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004066 asparagine synthase (glutamine-hydrolyzing) activity IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006357 regulation of transcription by RNA polymerase II IEP Predicted GO
BP GO:0006528 asparagine metabolic process IEP Predicted GO
BP GO:0006529 asparagine biosynthetic process IEP Predicted GO
BP GO:0007165 signal transduction IEP Predicted GO
MF GO:0008430 selenium binding IEP Predicted GO
BP GO:0009066 aspartate family amino acid metabolic process IEP Predicted GO
BP GO:0009067 aspartate family amino acid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016160 amylase activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
MF GO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0051087 chaperone binding IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 68 111
No external refs found!