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  5. Glyma.05G215300

Glyma.05G215300


Description : TRICHOME BIREFRINGENCE-LIKE 23


Gene families : OG_42_0000195 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.05G215300
Cluster HCCA clusters: Cluster_260

Target Alias Description ECC score Gene Family Method Actions
HORVU3Hr1G058830.3 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU7Hr1G089640.1 No alias mannan O-acetyltransferase *(MOAT) 0.05 Orthogroups_2024-Update
MA_10428196g0010 No alias no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
Solyc02g089680 No alias Trichome birefringence-like 19 (AHRD V3.3 *** A0A061EH35_THECC) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000702 oxidized base lesion DNA N-glycosylase activity IEP Predicted GO
MF GO:0003684 damaged DNA binding IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006284 base-excision repair IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
MF GO:0008534 oxidized purine nucleobase lesion DNA N-glycosylase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016799 hydrolase activity, hydrolyzing N-glycosyl compounds IEP Predicted GO
MF GO:0019104 DNA N-glycosylase activity IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR026057 PC-Esterase 159 449
IPR025846 PMR5_N_dom 105 158
No external refs found!