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  5. Glyma.06G043900

Glyma.06G043900


Description : CYCLIN A3;4


Gene families : OG_42_0000120 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G043900
Cluster HCCA clusters: Cluster_170

Target Alias Description ECC score Gene Family Method Actions
230742 No alias CYCLIN B2;4 0.06 Orthogroups_2024-Update
97411 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
A4A49_05961 No alias g2mitotic-specific cyclin-1 0.06 Orthogroups_2024-Update
A4A49_12698 No alias cyclin-a1-3 0.05 Orthogroups_2024-Update
A4A49_20167 No alias cyclin-b2-4 0.03 Orthogroups_2024-Update
A4A49_35953 No alias g2mitotic-specific cyclin s13-6 0.08 Orthogroups_2024-Update
A4A49_40931 No alias g2mitotic-specific cyclin s13-6 0.04 Orthogroups_2024-Update
At1g20590 No alias Cyclin-B2-5 [Source:UniProtKB/Swiss-Prot;Acc:Q9LM91] 0.07 Orthogroups_2024-Update
At1g34460 No alias CYCLIN B1;5 [Source:TAIR;Acc:AT1G34460] 0.03 Orthogroups_2024-Update
At1g44110 No alias CYCA1 [Source:UniProtKB/TrEMBL;Acc:A0A178W0H5] 0.08 Orthogroups_2024-Update
At1g76310 No alias CYCLIN B2;4 [Source:TAIR;Acc:AT1G76310] 0.06 Orthogroups_2024-Update
At2g26760 No alias CYCB1 [Source:UniProtKB/TrEMBL;Acc:A0A178VPU5] 0.03 Orthogroups_2024-Update
At4g35620 No alias Cyclin-B2-2 [Source:UniProtKB/Swiss-Prot;Acc:Q39070] 0.05 Orthogroups_2024-Update
At4g37490 No alias Cyclin-B1-1 [Source:UniProtKB/Swiss-Prot;Acc:P30183] 0.05 Orthogroups_2024-Update
Brara.B00199.1 No alias regulatory protein *(CYCB) of cell cycle 0.07 Orthogroups_2024-Update
Brara.C00237.1 No alias regulatory protein *(CYCB) of cell cycle 0.08 Orthogroups_2024-Update
Brara.E01867.1 No alias regulatory protein *(TAM) involved in metaphase to... 0.09 Orthogroups_2024-Update
Brara.G00692.1 No alias regulatory protein *(CYCB) of cell cycle 0.05 Orthogroups_2024-Update
Brara.G03427.1 No alias regulatory protein *(CYCB) of cell cycle 0.02 Orthogroups_2024-Update
Kfl00112_0070 kfl00112_0070_v1.... (at1g80370 : 326.0) Cyclin A2;4 (CYCA2;4); CONTAINS... 0.01 Orthogroups_2024-Update
Kfl00560_0010 kfl00560_0010_v1.1 (at1g76310 : 298.0) core cell cycle genes; CYCLIN B2;4... 0.07 Orthogroups_2024-Update
MA_28323g0010 No alias (at5g11300 : 355.0) mitotic-like cyclin, core cell cycle... 0.08 Orthogroups_2024-Update
MA_6619g0010 No alias (at1g44110 : 409.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.11 Orthogroups_2024-Update
MA_88982g0010 No alias (at5g11300 : 380.0) mitotic-like cyclin, core cell cycle... 0.05 Orthogroups_2024-Update
Mp2g25500.1 No alias cyclin (CYCA) 0.02 Orthogroups_2024-Update
Mp5g10030.1 No alias cyclin (CYCB) 0.07 Orthogroups_2024-Update
PSME_00031546-RA No alias (at1g44110 : 410.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.05 Orthogroups_2024-Update
Potri.002G010000 No alias CYCLIN B2;4 0.03 Orthogroups_2024-Update
Potri.005G181400 No alias Cyclin A1;1 0.04 Orthogroups_2024-Update
Potri.016G033000 No alias Cyclin family protein 0.04 Orthogroups_2024-Update
Pp1s271_10V6 No alias ccb15_orysj ame: full=cyclin-b1-5 ame: full=g2... 0.03 Orthogroups_2024-Update
Pp1s84_31V6 No alias n-terminal domain containing expressed 0.02 Orthogroups_2024-Update
Sobic.006G179200.1 No alias regulatory protein *(CYCB) of cell cycle 0.03 Orthogroups_2024-Update
Solyc01g009040 No alias cyclinB1_4 0.11 Orthogroups_2024-Update
Solyc02g082820 No alias cyclin B2 0.04 Orthogroups_2024-Update
Solyc03g032190 No alias cyclinB2_7 0.09 Orthogroups_2024-Update
Solyc03g120440 No alias cyclin A2_1 0.04 Orthogroups_2024-Update
Solyc04g078310 No alias cyclin A3_1 0.06 Orthogroups_2024-Update
Solyc04g082430 No alias cyclinB2_4 0.09 Orthogroups_2024-Update
Solyc06g065680 No alias cyclin A2 0.09 Orthogroups_2024-Update
Solyc07g066660 No alias cyclinB3_1 0.11 Orthogroups_2024-Update
Solyc10g078330 No alias B-type cyclin 0.1 Orthogroups_2024-Update
Solyc10g080950 No alias cyclinB1_2 0.12 Orthogroups_2024-Update
Solyc11g005090 No alias cyclin A1 0.11 Orthogroups_2024-Update
Solyc12g088470 No alias cyclin A3_4 0.08 Orthogroups_2024-Update
Sopen01g004530 No alias Cyclin, N-terminal domain 0.12 Orthogroups_2024-Update
Sopen02g027620 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen03g006030 No alias Cyclin, N-terminal domain 0.08 Orthogroups_2024-Update
Sopen04g031900 No alias Cyclin, N-terminal domain 0.03 Orthogroups_2024-Update
Sopen04g036020 No alias Cyclin, N-terminal domain 0.14 Orthogroups_2024-Update
Sopen10g028990 No alias Cyclin, N-terminal domain 0.06 Orthogroups_2024-Update
Sopen10g031460 No alias Cyclin, N-terminal domain 0.14 Orthogroups_2024-Update
Sopen12g030500 No alias Cyclin, N-terminal domain 0.02 Orthogroups_2024-Update
evm.model.contig_554.3 No alias (q40671|ccnb2_orysa : 240.0) G2/mitotic-specific... 0.04 Orthogroups_2024-Update
evm.model.tig00000076.67 No alias (at1g44110 : 156.0) Cyclin A1;1 (CYCA1;1); CONTAINS... 0.02 Orthogroups_2024-Update
evm.model.tig00000769.38 No alias (at1g76310 : 252.0) core cell cycle genes; CYCLIN B2;4... 0.06 Orthogroups_2024-Update

Type GO Term Name Evidence Source
CC GO:0005634 nucleus IEA InterProScan predictions
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
CC GO:0000796 condensin complex IEP Predicted GO
CC GO:0000808 origin recognition complex IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003690 double-stranded DNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0003918 DNA topoisomerase type II (ATP-hydrolyzing) activity IEP Predicted GO
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005664 nuclear origin of replication recognition complex IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006259 DNA metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006281 DNA repair IEP Predicted GO
BP GO:0006298 mismatch repair IEP Predicted GO
BP GO:0006323 DNA packaging IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006974 cellular response to DNA damage stimulus IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
BP GO:0007059 chromosome segregation IEP Predicted GO
BP GO:0007076 mitotic chromosome condensation IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0008092 cytoskeletal protein binding IEP Predicted GO
MF GO:0008094 DNA-dependent ATPase activity IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015631 tubulin binding IEP Predicted GO
MF GO:0016462 pyrophosphatase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP Predicted GO
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0017111 nucleoside-triphosphatase activity IEP Predicted GO
BP GO:0022402 cell cycle process IEP Predicted GO
BP GO:0022414 reproductive process IEP Predicted GO
BP GO:0030261 chromosome condensation IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030983 mismatched DNA binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0033554 cellular response to stress IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044454 nuclear chromosome part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0045132 meiotic chromosome segregation IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0051716 cellular response to stimulus IEP Predicted GO
MF GO:0061505 DNA topoisomerase II activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
BP GO:0098813 nuclear chromosome segregation IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
BP GO:1903046 meiotic cell cycle process IEP Predicted GO
BP GO:1903047 mitotic cell cycle process IEP Predicted GO
InterPro domains Description Start Stop
IPR006671 Cyclin_N 85 213
IPR004367 Cyclin_C-dom 216 338
No external refs found!