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  5. Glyma.06G086900

Glyma.06G086900


Description : Protein of unknown function (DUF1677)


Gene families : OG_42_0000341 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000341_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.06G086900
Cluster HCCA clusters: Cluster_51

Target Alias Description ECC score Gene Family Method Actions
A4A49_22104 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Bradi2g06140 No alias Protein of unknown function (DUF1677) 0.02 Orthogroups_2024-Update
Glyma.07G016400 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
Glyma.08G201800 No alias Protein of unknown function (DUF1677) 0.03 Orthogroups_2024-Update
LOC_Os01g54170 No alias expressed protein 0.02 Orthogroups_2024-Update
Pp1s2_210V6 No alias F19K16.25; expressed protein [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Seita.4G038600.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G094700.1 No alias Unknown function 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
CC GO:0005787 signal peptidase complex IEP Predicted GO
BP GO:0006465 signal peptide processing IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
BP GO:0016485 protein processing IEP Predicted GO
CC GO:0030532 small nuclear ribonucleoprotein complex IEP Predicted GO
CC GO:0046540 U4/U6 x U5 tri-snRNP complex IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0051604 protein maturation IEP Predicted GO
CC GO:0097525 spliceosomal snRNP complex IEP Predicted GO
CC GO:0097526 spliceosomal tri-snRNP complex IEP Predicted GO
CC GO:0120114 Sm-like protein family complex IEP Predicted GO
CC GO:1905368 peptidase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012876 DUF1677_pln 38 125
No external refs found!