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  5. Glyma.07G015200

Glyma.07G015200


Description : phytochrome-associated protein 1


Gene families : OG_42_0000083 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G015200
Cluster HCCA clusters: Cluster_465

Target Alias Description ECC score Gene Family Method Actions
Brara.E02502.1 No alias transcriptional repressor *(IAA/AUX) 0.03 Orthogroups_2024-Update
Glyma.13G361100 No alias indole-3-acetic acid inducible 19 0.02 Orthogroups_2024-Update
Glyma.15G017500 No alias phytochrome-associated protein 2 0.04 Orthogroups_2024-Update
Potri.001G190300 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Potri.003G048100 No alias phytochrome-associated protein 1 0.03 Orthogroups_2024-Update
Solyc03g120500 No alias auxin-regulated IAA27 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006914 autophagy IEP Predicted GO
MF GO:0008146 sulfotransferase activity IEP Predicted GO
MF GO:0009916 alternative oxidase activity IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP Predicted GO
MF GO:0016782 transferase activity, transferring sulfur-containing groups IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0061919 process utilizing autophagic mechanism IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
InterPro domains Description Start Stop
IPR033389 AUX/IAA_dom 14 307
No external refs found!