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  5. Glyma.07G055900

Glyma.07G055900


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0001641 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001641_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G055900
Cluster HCCA clusters: Cluster_443

Target Alias Description ECC score Gene Family Method Actions
Bradi5g23890 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
GRMZM5G892758 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 Orthogroups_2024-Update
PSME_00010578-RA No alias (at4g28080 : 1306.0) Tetratricopeptide repeat (TPR)-like... 0.02 Orthogroups_2024-Update
Solyc05g050610 No alias No description available 0.04 Orthogroups_2024-Update
Solyc05g050630 No alias Tetratricopeptide repeat (TPR)-like superfamily protein... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP Predicted GO
CC GO:0000151 ubiquitin ligase complex IEP Predicted GO
MF GO:0000166 nucleotide binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP Predicted GO
MF GO:0003857 3-hydroxyacyl-CoA dehydrogenase activity IEP Predicted GO
MF GO:0003916 DNA topoisomerase activity IEP Predicted GO
MF GO:0004177 aminopeptidase activity IEP Predicted GO
MF GO:0004555 alpha,alpha-trehalase activity IEP Predicted GO
MF GO:0004888 transmembrane signaling receptor activity IEP Predicted GO
MF GO:0004970 ionotropic glutamate receptor activity IEP Predicted GO
MF GO:0005230 extracellular ligand-gated ion channel activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
CC GO:0005694 chromosome IEP Predicted GO
CC GO:0005777 peroxisome IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP Predicted GO
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006265 DNA topological change IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0007031 peroxisome organization IEP Predicted GO
MF GO:0008066 glutamate receptor activity IEP Predicted GO
MF GO:0008144 drug binding IEP Predicted GO
BP GO:0009987 cellular process IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0015927 trehalase activity IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
MF GO:0016151 nickel cation binding IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
BP GO:0017038 protein import IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
BP GO:0019627 urea metabolic process IEP Predicted GO
MF GO:0022824 transmitter-gated ion channel activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022835 transmitter-gated channel activity IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030594 neurotransmitter receptor activity IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
MF GO:0034450 ubiquitin-ubiquitin ligase activity IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
MF GO:0035091 phosphatidylinositol binding IEP Predicted GO
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0038023 signaling receptor activity IEP Predicted GO
CC GO:0042579 microbody IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0043419 urea catabolic process IEP Predicted GO
BP GO:0043605 cellular amide catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044262 cellular carbohydrate metabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
MF GO:0060089 molecular transducer activity IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0070569 uridylyltransferase activity IEP Predicted GO
BP GO:0071103 DNA conformation change IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0071941 nitrogen cycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901265 nucleoside phosphate binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1990234 transferase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR033646 CLU-central 695 836
IPR028275 CLU_N 44 114
No external refs found!