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  5. Glyma.07G114900

Glyma.07G114900


Description : ribosomal protein L4


Gene families : OG_42_0008241 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0008241_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G114900
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
Bradi1g67170 No alias ribosomal protein L4 0.06 Orthogroups_2024-Update
Brara.J00510.1 No alias component *(uL4c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Cre11.g479500 No alias ribosomal protein L4 0.05 Orthogroups_2024-Update
HORVU4Hr1G060970.1 No alias component *(uL4c) of large plastid ribosomal-subunit proteome 0.06 Orthogroups_2024-Update
Kfl00160_0190 kfl00160_0190_v1.1 (o80361|rk4_tobac : 221.0) 50S ribosomal protein L4,... 0.02 Orthogroups_2024-Update
Potri.006G221100 No alias ribosomal protein L4 0.04 Orthogroups_2024-Update
Seita.9G457200.1 No alias component *(uL4c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Sobic.001G427000.1 No alias component *(uL4c) of large plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
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Type GO Term Name Evidence Source
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003746 translation elongation factor activity IEP Predicted GO
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
BP GO:0006414 translational elongation IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0016043 cellular component organization IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
CC GO:0016592 mediator complex IEP Predicted GO
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Predicted GO
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0022618 ribonucleoprotein complex assembly IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034622 cellular protein-containing complex assembly IEP Predicted GO
BP GO:0042255 ribosome assembly IEP Predicted GO
BP GO:0042256 mature ribosome assembly IEP Predicted GO
MF GO:0043021 ribonucleoprotein complex binding IEP Predicted GO
MF GO:0043022 ribosome binding IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
MF GO:0044877 protein-containing complex binding IEP Predicted GO
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
BP GO:0070925 organelle assembly IEP Predicted GO
BP GO:0071826 ribonucleoprotein complex subunit organization IEP Predicted GO
BP GO:0071840 cellular component organization or biogenesis IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002136 Ribosomal_L4/L1e 82 260
No external refs found!