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  5. Glyma.07G134600

Glyma.07G134600


Description : RING-H2 finger C2A


Gene families : OG_42_0001974 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001974_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G134600
Cluster HCCA clusters: Cluster_231

Target Alias Description ECC score Gene Family Method Actions
Bradi2g39220 No alias zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
GRMZM2G364612 No alias zinc finger (C3HC4-type RING finger) family protein 0.02 Orthogroups_2024-Update
GRMZM2G567897 No alias zinc finger (C3HC4-type RING finger) family protein 0.03 Orthogroups_2024-Update
Glyma.13G338400 No alias RING-H2 finger C2A 0.04 Orthogroups_2024-Update
LOC_Os01g74040 No alias zinc finger, RING-type, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os05g01940 No alias zinc finger, RING-type, putative, expressed 0.03 Orthogroups_2024-Update
Sobic.001G422900.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Sobic.009G010400.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR010543 DUF1117 215 302
IPR001841 Znf_RING 157 199
IPR039525 RNF126-like_zinc-ribbon 9 41
No external refs found!