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  5. Glyma.07G196000

Glyma.07G196000


Description : RING membrane-anchor 1


Gene families : OG_42_0000548 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000548_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G196000
Cluster HCCA clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
A4A49_02918 No alias e3 ubiquitin-protein ligase rma1h1 0.02 Orthogroups_2024-Update
At1g74990 No alias At1g74990 [Source:UniProtKB/TrEMBL;Acc:Q9S7D6] 0.03 Orthogroups_2024-Update
Brara.A01799.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Brara.K00033.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.04 Orthogroups_2024-Update
Glyma.06G293400 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
Glyma.12G112000 No alias RING membrane-anchor 1 0.03 Orthogroups_2024-Update
HORVU2Hr1G091220.1 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.02 Orthogroups_2024-Update
HORVU5Hr1G011730.2 No alias E3 ubiquitin ligase *(RMA/MUSE) 0.03 Orthogroups_2024-Update
Potri.002G133000 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Solyc07g063200 No alias RING/U-box superfamily protein (AHRD V3.3 *-* AT2G42030.1) 0.02 Orthogroups_2024-Update
Sopen02g023160 No alias Zinc finger, C3HC4 type (RING finger) 0.02 Orthogroups_2024-Update
Sopen10g022970 No alias Zinc finger, C3HC4 type (RING finger) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046872 metal ion binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0005337 nucleoside transmembrane transporter activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
CC GO:0005875 microtubule associated complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006220 pyrimidine nucleotide metabolic process IEP Predicted GO
BP GO:0006221 pyrimidine nucleotide biosynthetic process IEP Predicted GO
BP GO:0008593 regulation of Notch signaling pathway IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
BP GO:0009966 regulation of signal transduction IEP Predicted GO
BP GO:0009967 positive regulation of signal transduction IEP Predicted GO
MF GO:0009975 cyclase activity IEP Predicted GO
MF GO:0009976 tocopherol cyclase activity IEP Predicted GO
BP GO:0010646 regulation of cell communication IEP Predicted GO
BP GO:0010647 positive regulation of cell communication IEP Predicted GO
BP GO:0015858 nucleoside transport IEP Predicted GO
BP GO:0015931 nucleobase-containing compound transport IEP Predicted GO
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Predicted GO
BP GO:0023051 regulation of signaling IEP Predicted GO
BP GO:0023056 positive regulation of signaling IEP Predicted GO
CC GO:0030286 dynein complex IEP Predicted GO
BP GO:0045747 positive regulation of Notch signaling pathway IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0048522 positive regulation of cellular process IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0048584 positive regulation of response to stimulus IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901264 carbohydrate derivative transport IEP Predicted GO
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Predicted GO
BP GO:1901642 nucleoside transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR018957 Znf_C3HC4_RING-type 34 80
No external refs found!