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  5. Glyma.07G208750

Glyma.07G208750


Description : Tetratricopeptide repeat (TPR)-like superfamily protein


Gene families : OG_42_0003994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003994_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.07G208750
Cluster HCCA clusters: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
MA_445076g0010 No alias (at2g13600 : 511.0) Pentatricopeptide repeat (PPR)... 0.02 Orthogroups_2024-Update
Potri.005G131800 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.03 Orthogroups_2024-Update
Seita.3G019500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc02g090240 No alias Pentatricopeptide repeat-containing protein, putative... 0.03 Orthogroups_2024-Update
Sopen03g003310 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004061 arylformamidase activity IEP Predicted GO
BP GO:0006568 tryptophan metabolic process IEP Predicted GO
BP GO:0006569 tryptophan catabolic process IEP Predicted GO
BP GO:0006576 cellular biogenic amine metabolic process IEP Predicted GO
BP GO:0006586 indolalkylamine metabolic process IEP Predicted GO
BP GO:0006766 vitamin metabolic process IEP Predicted GO
BP GO:0006767 water-soluble vitamin metabolic process IEP Predicted GO
BP GO:0006772 thiamine metabolic process IEP Predicted GO
BP GO:0008152 metabolic process IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009058 biosynthetic process IEP Predicted GO
BP GO:0009063 cellular amino acid catabolic process IEP Predicted GO
BP GO:0009074 aromatic amino acid family catabolic process IEP Predicted GO
BP GO:0009110 vitamin biosynthetic process IEP Predicted GO
BP GO:0009228 thiamine biosynthetic process IEP Predicted GO
BP GO:0009235 cobalamin metabolic process IEP Predicted GO
BP GO:0009236 cobalamin biosynthetic process IEP Predicted GO
BP GO:0009310 amine catabolic process IEP Predicted GO
BP GO:0016054 organic acid catabolic process IEP Predicted GO
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP Predicted GO
MF GO:0016852 sirohydrochlorin cobaltochelatase activity IEP Predicted GO
BP GO:0019441 tryptophan catabolic process to kynurenine IEP Predicted GO
BP GO:0042180 cellular ketone metabolic process IEP Predicted GO
BP GO:0042364 water-soluble vitamin biosynthetic process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0042402 cellular biogenic amine catabolic process IEP Predicted GO
BP GO:0042430 indole-containing compound metabolic process IEP Predicted GO
BP GO:0042436 indole-containing compound catabolic process IEP Predicted GO
BP GO:0042537 benzene-containing compound metabolic process IEP Predicted GO
BP GO:0042723 thiamine-containing compound metabolic process IEP Predicted GO
BP GO:0042724 thiamine-containing compound biosynthetic process IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
BP GO:0044106 cellular amine metabolic process IEP Predicted GO
BP GO:0044281 small molecule metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046218 indolalkylamine catabolic process IEP Predicted GO
BP GO:0046395 carboxylic acid catabolic process IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
BP GO:0055114 oxidation-reduction process IEP Predicted GO
BP GO:0070189 kynurenine metabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901606 alpha-amino acid catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 609 655
IPR002885 Pentatricopeptide_repeat 709 756
IPR002885 Pentatricopeptide_repeat 548 573
IPR002885 Pentatricopeptide_repeat 382 410
IPR002885 Pentatricopeptide_repeat 282 309
IPR002885 Pentatricopeptide_repeat 784 808
IPR002885 Pentatricopeptide_repeat 413 442
IPR002885 Pentatricopeptide_repeat 580 604
IPR002885 Pentatricopeptide_repeat 520 544
No external refs found!