Description : Pentatricopeptide repeat (PPR) superfamily protein
Gene families : OG_42_0000001 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Glycine release: Glyma.07G226200 | |
Cluster | HCCA clusters: Cluster_357 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
A4A49_23672 | No alias | pentatricopeptide repeat-containing protein, mitochondrial | 0.03 | Orthogroups_2024-Update | |
Bradi2g53450 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Brara.A02436.1 | No alias | RNA editing factor *(CRR2) | 0.03 | Orthogroups_2024-Update | |
Brara.F00415.1 | No alias | Unknown function | 0.04 | Orthogroups_2024-Update | |
Brara.F03480.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
Glyma.06G161900 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.07G068600 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Glyma.13G313200 | No alias | Tetratricopeptide repeat (TPR)-like superfamily protein | 0.03 | Orthogroups_2024-Update | |
HORVU2Hr1G053030.5 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU3Hr1G023070.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G023090.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
HORVU3Hr1G036010.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
HORVU4Hr1G014730.1 | No alias | Unknown function | 0.03 | Orthogroups_2024-Update | |
LOC_Os07g13540 | No alias | pentatricopeptide repeat domain containing protein,... | 0.02 | Orthogroups_2024-Update | |
MA_668740g0020 | No alias | (at3g13770 : 627.0) Pentatricopeptide repeat (PPR)... | 0.03 | Orthogroups_2024-Update | |
MA_90791g0010 | No alias | (at4g02750 : 505.0) Tetratricopeptide repeat (TPR)-like... | 0.03 | Orthogroups_2024-Update | |
PSME_00006211-RA | No alias | (at3g46790 : 145.0) Encodes a member of a PCMP (plant... | 0.03 | Orthogroups_2024-Update | |
Potri.002G175900 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Potri.004G071800 | No alias | Pentatricopeptide repeat (PPR) superfamily protein | 0.03 | Orthogroups_2024-Update | |
Seita.5G124400.1 | No alias | RNA editing factor *(OTP81) | 0.03 | Orthogroups_2024-Update | |
Sobic.010G189200.1 | No alias | Unknown function | 0.02 | Orthogroups_2024-Update | |
Solyc01g010510 | No alias | Pentatricopeptide repeat (PPR) superfamily protein (AHRD... | 0.03 | Orthogroups_2024-Update | |
Solyc01g110010 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc07g008480 | No alias | Pentatricopeptide repeat-containing protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Solyc10g080220 | No alias | Pentatricopeptide repeat superfamily protein (AHRD V3.3... | 0.03 | Orthogroups_2024-Update | |
Sopen01g032720 | No alias | PPR repeat family | 0.04 | Orthogroups_2024-Update | |
Sopen12g021390 | No alias | PPR repeat | 0.03 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0000030 | mannosyltransferase activity | IEP | Predicted GO |
MF | GO:0003779 | actin binding | IEP | Predicted GO |
MF | GO:0004298 | threonine-type endopeptidase activity | IEP | Predicted GO |
MF | GO:0004584 | dolichyl-phosphate-mannose-glycolipid alpha-mannosyltransferase activity | IEP | Predicted GO |
MF | GO:0004797 | thymidine kinase activity | IEP | Predicted GO |
CC | GO:0005739 | mitochondrion | IEP | Predicted GO |
CC | GO:0005839 | proteasome core complex | IEP | Predicted GO |
BP | GO:0006497 | protein lipidation | IEP | Predicted GO |
BP | GO:0006505 | GPI anchor metabolic process | IEP | Predicted GO |
BP | GO:0006506 | GPI anchor biosynthetic process | IEP | Predicted GO |
BP | GO:0006643 | membrane lipid metabolic process | IEP | Predicted GO |
BP | GO:0006661 | phosphatidylinositol biosynthetic process | IEP | Predicted GO |
BP | GO:0006664 | glycolipid metabolic process | IEP | Predicted GO |
MF | GO:0008092 | cytoskeletal protein binding | IEP | Predicted GO |
BP | GO:0008654 | phospholipid biosynthetic process | IEP | Predicted GO |
BP | GO:0009247 | glycolipid biosynthetic process | IEP | Predicted GO |
MF | GO:0019136 | deoxynucleoside kinase activity | IEP | Predicted GO |
MF | GO:0019205 | nucleobase-containing compound kinase activity | IEP | Predicted GO |
MF | GO:0019206 | nucleoside kinase activity | IEP | Predicted GO |
CC | GO:0019773 | proteasome core complex, alpha-subunit complex | IEP | Predicted GO |
BP | GO:0030001 | metal ion transport | IEP | Predicted GO |
CC | GO:0031966 | mitochondrial membrane | IEP | Predicted GO |
MF | GO:0043015 | gamma-tubulin binding | IEP | Predicted GO |
BP | GO:0045017 | glycerolipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046467 | membrane lipid biosynthetic process | IEP | Predicted GO |
BP | GO:0046474 | glycerophospholipid biosynthetic process | IEP | Predicted GO |
MF | GO:0070003 | threonine-type peptidase activity | IEP | Predicted GO |
BP | GO:1903509 | liposaccharide metabolic process | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002885 | Pentatricopeptide_repeat | 303 | 350 |
IPR002885 | Pentatricopeptide_repeat | 504 | 552 |
IPR002885 | Pentatricopeptide_repeat | 402 | 450 |
IPR002885 | Pentatricopeptide_repeat | 273 | 294 |
IPR002885 | Pentatricopeptide_repeat | 200 | 227 |
IPR002885 | Pentatricopeptide_repeat | 580 | 603 |
IPR002885 | Pentatricopeptide_repeat | 170 | 196 |
No external refs found! |