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  5. Glyma.08G019400

Glyma.08G019400


Description : P-loop containing nucleoside triphosphate hydrolases superfamily protein


Gene families : OG_42_0000296 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G019400
Cluster HCCA clusters: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Glyma.20G163900 No alias P-loop containing nucleoside triphosphate hydrolases... 0.04 Orthogroups_2024-Update
HORVU1Hr1G092440.3 No alias Unknown function 0.03 Orthogroups_2024-Update
Kfl00036_0350 kfl00036_0350_v1.1 (at4g02480 : 517.0) AAA-type ATPase family protein;... 0.02 Orthogroups_2024-Update
PSME_00002806-RA No alias (at3g19740 : 352.0) P-loop containing nucleoside... 0.02 Orthogroups_2024-Update
Potri.001G097600 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP Predicted GO
MF GO:0004518 nuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
BP GO:0006397 mRNA processing IEP Predicted GO
BP GO:0016071 mRNA metabolic process IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
BP GO:0018193 peptidyl-amino acid modification IEP Predicted GO
BP GO:0018208 peptidyl-proline modification IEP Predicted GO
MF GO:0061630 ubiquitin protein ligase activity IEP Predicted GO
MF GO:0061659 ubiquitin-like protein ligase activity IEP Predicted GO
MF GO:0140098 catalytic activity, acting on RNA IEP Predicted GO
MF GO:0140101 catalytic activity, acting on a tRNA IEP Predicted GO
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 572 702
No external refs found!