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  5. Glyma.08G024900

Glyma.08G024900


Description : Translation elongation factor EF1B/ribosomal protein S6 family protein


Gene families : OG_42_0007385 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007385_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G024900
Cluster HCCA clusters: Cluster_302

Target Alias Description ECC score Gene Family Method Actions
A4A49_03704 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.03 Orthogroups_2024-Update
A4A49_12743 No alias 30s ribosomal protein s6 alpha, chloroplastic 0.04 Orthogroups_2024-Update
Brara.I01293.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Cre12.g520600 No alias Translation elongation factor EF1B/ribosomal protein S6... 0.06 Orthogroups_2024-Update
HORVU5Hr1G120250.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.07 Orthogroups_2024-Update
Kfl00077_0230 kfl00077_0230_v1.1 (p82403|rr6_spiol : 125.0) 30S ribosomal protein S6... 0.02 Orthogroups_2024-Update
Seita.9G016600.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.05 Orthogroups_2024-Update
Sobic.001G017000.1 No alias component *(uS6c) of small plastid ribosomal-subunit proteome 0.04 Orthogroups_2024-Update
Solyc08g082690 No alias Ribosomal protein S6 (AHRD V3.3 *** A0A103XFW4_CYNCS) 0.03 Orthogroups_2024-Update
Sopen08g030910 No alias Ribosomal protein S6 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA InterProScan predictions
CC GO:0005840 ribosome IEA InterProScan predictions
BP GO:0006412 translation IEA InterProScan predictions
MF GO:0019843 rRNA binding IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0004784 superoxide dismutase activity IEP Predicted GO
CC GO:0005622 intracellular IEP Predicted GO
BP GO:0006643 membrane lipid metabolic process IEP Predicted GO
BP GO:0006664 glycolipid metabolic process IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0006801 superoxide metabolic process IEP Predicted GO
MF GO:0008173 RNA methyltransferase activity IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0008483 transaminase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
MF GO:0009029 tetraacyldisaccharide 4'-kinase activity IEP Predicted GO
BP GO:0009245 lipid A biosynthetic process IEP Predicted GO
BP GO:0009247 glycolipid biosynthetic process IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Predicted GO
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Predicted GO
MF GO:0016872 intramolecular lyase activity IEP Predicted GO
CC GO:0030880 RNA polymerase complex IEP Predicted GO
CC GO:0043190 ATP-binding cassette (ABC) transporter complex IEP Predicted GO
BP GO:0046467 membrane lipid biosynthetic process IEP Predicted GO
BP GO:0046493 lipid A metabolic process IEP Predicted GO
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP Predicted GO
BP GO:0072593 reactive oxygen species metabolic process IEP Predicted GO
CC GO:0098533 ATPase dependent transmembrane transport complex IEP Predicted GO
BP GO:1901269 lipooligosaccharide metabolic process IEP Predicted GO
BP GO:1901271 lipooligosaccharide biosynthetic process IEP Predicted GO
CC GO:1902494 catalytic complex IEP Predicted GO
CC GO:1902495 transmembrane transporter complex IEP Predicted GO
BP GO:1903509 liposaccharide metabolic process IEP Predicted GO
CC GO:1904949 ATPase complex IEP Predicted GO
CC GO:1990351 transporter complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000529 Ribosomal_S6 110 206
No external refs found!