Glyma.08G027800

Description : Transcriptional factor B3 family protein / auxin-responsive factor AUX/IAA-related

Gene families : OG_42_0000050 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000050_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Glycine release: Glyma.08G027800
Cluster	HCCA clusters: Cluster_113

Target	Alias	Description	ECC score	Gene Family Method
A4A49_07736	No alias	auxin response factor 5	0.03	Orthogroups_2024-Update
A4A49_15968	No alias	auxin response factor 6	0.03	Orthogroups_2024-Update
A4A49_17259	No alias	auxin response factor 18	0.02	Orthogroups_2024-Update
A4A49_26861	No alias	auxin response factor 18	0.03	Orthogroups_2024-Update
A4A49_35810	No alias	auxin response factor 8	0.02	Orthogroups_2024-Update
Bradi1g34340	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Bradi1g46602	No alias	Transcriptional factor B3 family protein /...	0.03	Orthogroups_2024-Update
Brara.F01415.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Brara.I00676.1	No alias	ARF-type transcription factor	0.04	Orthogroups_2024-Update
GRMZM2G179121	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Glyma.08G100100	No alias	auxin response factor 8	0.05	Orthogroups_2024-Update
Glyma.09G072200	No alias	Transcriptional factor B3 family protein /...	0.05	Orthogroups_2024-Update
Glyma.11G145500	No alias	auxin response factor 10	0.03	Orthogroups_2024-Update
Glyma.12G174100	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Glyma.13G140600	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Glyma.15G181000	No alias	auxin response factor 19	0.06	Orthogroups_2024-Update
Glyma.18G184500	No alias	auxin response factor 9	0.05	Orthogroups_2024-Update
Glyma.19G181900	No alias	auxin response factor 16	0.04	Orthogroups_2024-Update
LOC_Os01g54990	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g70270	No alias	auxin response factor, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os11g32110	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
LOC_Os12g41950	No alias	auxin response factor, putative, expressed	0.03	Orthogroups_2024-Update
MA_10432349g0010	No alias	(at5g62000 : 394.0) Encodes an auxin response factor....	0.03	Orthogroups_2024-Update
MA_40335g0010	No alias	(at5g62000 : 752.0) Encodes an auxin response factor....	0.02	Orthogroups_2024-Update
Mp1g12750.1	No alias	transcription factor (ARF)	0.02	Orthogroups_2024-Update
Potri.008G039000	No alias	auxin response factor 16	0.03	Orthogroups_2024-Update
Pp1s339_47V6	No alias	auxin response factor 10	0.02	Orthogroups_2024-Update
Pp1s64_138V6	No alias	arf1-binding protein	0.02	Orthogroups_2024-Update
Pp1s86_1V6	No alias	auxin response	0.03	Orthogroups_2024-Update
Seita.4G262300.1	No alias	ARF-type transcription factor	0.02	Orthogroups_2024-Update
Seita.5G438100.1	No alias	ARF-type transcription factor	0.03	Orthogroups_2024-Update
Solyc05g047460	No alias	Auxin Response Factor 7B	0.03	Orthogroups_2024-Update
Sopen00g003680	No alias	Auxin response factor	0.02	Orthogroups_2024-Update
Sopen01g039790	No alias	AUX/IAA family	0.03	Orthogroups_2024-Update
Sopen09g002650	No alias	Auxin response factor	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	InterProScan predictions
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009719	response to endogenous stimulus	None	Extended
BP	GO:0009725	response to hormone	IEA	InterProScan predictions
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010033	response to organic substance	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0042221	response to chemical	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003824	catalytic activity	IEP	Predicted GO
MF	GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0003989	acetyl-CoA carboxylase activity	IEP	Predicted GO
BP	GO:0006082	organic acid metabolic process	IEP	Predicted GO
BP	GO:0006284	base-excision repair	IEP	Predicted GO
BP	GO:0006464	cellular protein modification process	IEP	Predicted GO
BP	GO:0006629	lipid metabolic process	IEP	Predicted GO
BP	GO:0006631	fatty acid metabolic process	IEP	Predicted GO
BP	GO:0006633	fatty acid biosynthetic process	IEP	Predicted GO
BP	GO:0006694	steroid biosynthetic process	IEP	Predicted GO
BP	GO:0006766	vitamin metabolic process	IEP	Predicted GO
BP	GO:0006767	water-soluble vitamin metabolic process	IEP	Predicted GO
BP	GO:0006771	riboflavin metabolic process	IEP	Predicted GO
BP	GO:0008152	metabolic process	IEP	Predicted GO
BP	GO:0008202	steroid metabolic process	IEP	Predicted GO
MF	GO:0008378	galactosyltransferase activity	IEP	Predicted GO
BP	GO:0008610	lipid biosynthetic process	IEP	Predicted GO
MF	GO:0008686	3,4-dihydroxy-2-butanone-4-phosphate synthase activity	IEP	Predicted GO
BP	GO:0009110	vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0009231	riboflavin biosynthetic process	IEP	Predicted GO
BP	GO:0009987	cellular process	IEP	Predicted GO
MF	GO:0015079	potassium ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0016053	organic acid biosynthetic process	IEP	Predicted GO
MF	GO:0016229	steroid dehydrogenase activity	IEP	Predicted GO
MF	GO:0016421	CoA carboxylase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016829	lyase activity	IEP	Predicted GO
MF	GO:0016830	carbon-carbon lyase activity	IEP	Predicted GO
MF	GO:0016885	ligase activity, forming carbon-carbon bonds	IEP	Predicted GO
BP	GO:0019538	protein metabolic process	IEP	Predicted GO
BP	GO:0019752	carboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0031012	extracellular matrix	IEP	Predicted GO
BP	GO:0032787	monocarboxylic acid metabolic process	IEP	Predicted GO
MF	GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	IEP	Predicted GO
BP	GO:0036211	protein modification process	IEP	Predicted GO
BP	GO:0042364	water-soluble vitamin biosynthetic process	IEP	Predicted GO
BP	GO:0042726	flavin-containing compound metabolic process	IEP	Predicted GO
BP	GO:0042727	flavin-containing compound biosynthetic process	IEP	Predicted GO
BP	GO:0043170	macromolecule metabolic process	IEP	Predicted GO
BP	GO:0043412	macromolecule modification	IEP	Predicted GO
BP	GO:0043436	oxoacid metabolic process	IEP	Predicted GO
BP	GO:0044237	cellular metabolic process	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
BP	GO:0044255	cellular lipid metabolic process	IEP	Predicted GO
BP	GO:0044260	cellular macromolecule metabolic process	IEP	Predicted GO
BP	GO:0044267	cellular protein metabolic process	IEP	Predicted GO
BP	GO:0044281	small molecule metabolic process	IEP	Predicted GO
BP	GO:0044283	small molecule biosynthetic process	IEP	Predicted GO
CC	GO:0044421	extracellular region part	IEP	Predicted GO
BP	GO:0046394	carboxylic acid biosynthetic process	IEP	Predicted GO
MF	GO:0050080	malonyl-CoA decarboxylase activity	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO
BP	GO:0071805	potassium ion transmembrane transport	IEP	Predicted GO
BP	GO:0072330	monocarboxylic acid biosynthetic process	IEP	Predicted GO
MF	GO:0098599	palmitoyl hydrolase activity	IEP	Predicted GO
MF	GO:0140096	catalytic activity, acting on a protein	IEP	Predicted GO
BP	GO:1901564	organonitrogen compound metabolic process	IEP	Predicted GO
BP	GO:1901576	organic substance biosynthetic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR033389	AUX/IAA_dom	998	1086
IPR003340	B3_DNA-bd	132	233
IPR010525	Auxin_resp	258	341

External Links

No external refs found!

Glyma.08G027800

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation