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  5. Glyma.08G029000

Glyma.08G029000


Description : cytidine deaminase 1


Gene families : OG_42_0001694 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001694_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Glycine release: Glyma.08G029000
Cluster HCCA clusters: Cluster_271

Target Alias Description ECC score Gene Family Method Actions
At4g29600 No alias Cytidine deaminase 7 [Source:UniProtKB/Swiss-Prot;Acc:Q9SU87] 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004126 cytidine deaminase activity IEA InterProScan predictions
MF GO:0008270 zinc ion binding IEA InterProScan predictions
BP GO:0009972 cytidine deamination IEA InterProScan predictions
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP Predicted GO
MF GO:0003714 transcription corepressor activity IEP Predicted GO
MF GO:0003954 NADH dehydrogenase activity IEP Predicted GO
MF GO:0005509 calcium ion binding IEP Predicted GO
CC GO:0005739 mitochondrion IEP Predicted GO
BP GO:0006720 isoprenoid metabolic process IEP Predicted GO
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP Predicted GO
BP GO:0008299 isoprenoid biosynthetic process IEP Predicted GO
CC GO:0009507 chloroplast IEP Predicted GO
CC GO:0009536 plastid IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
CC GO:0031012 extracellular matrix IEP Predicted GO
CC GO:0043226 organelle IEP Predicted GO
CC GO:0043227 membrane-bounded organelle IEP Predicted GO
CC GO:0043229 intracellular organelle IEP Predicted GO
CC GO:0043231 intracellular membrane-bounded organelle IEP Predicted GO
CC GO:0044421 extracellular region part IEP Predicted GO
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP Predicted GO
InterPro domains Description Start Stop
IPR013171 Cyd/dCyd_deaminase_Zn-bd 122 252
IPR002125 CMP_dCMP_dom 45 103
No external refs found!